| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0508 |
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| Symbol | |
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| ID | 4251754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 588949 |
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| End bp | 590160 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638117067 |
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| Product | major facilitator transporter |
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| Protein accession | YP_732645 |
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| Protein GI | 113968852 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAAGCAG TTCAACCCCA GACTCAGGCT CAAAGCAGCG CGCTTTGGGT GTTACTCGCC
TTGGCATTAG GCACCTTTGC CTTAGGCACC ACAGAATTTG CCGCCATGAC CTTAGTGCCT
TATATCGCCA GTGATTTAAG TGTTGATGTC GCCCATGTGA GTTATGCCAT CAGTGCCTAT
GCCCTTGGGG TGGTGGTGGG CTCGCCCATC ATTATGGTGC TGGGGGTGAG GATTAAGCGG
CGCACGCTGT TAATCGCCTT GGCCGCCATG ATGGCGGTTG CCAATGGTTT AAGCGCCCTA
GCACCCAGCT TGAATTGGTT GGTCTTTTTC CGCTTTTTAA GTGGCTTGCC CCATGGGGCT
TACTTTGGGG TGGCTATGTT ACTGGCGGCG TCCTTAGTGC CCCCCGATAT GAAGGCTCGA
GCGGTTTCTC GGGTGATTAT CGGCTTAACC TTAGCCACTA TCGTTGGCGT GCCCTTCGCG
ACTTGGATGG GACAAACCGT CGGTTGGCGC TCAGGTATCG GCATAGTGGC GATTATTGCC
GCCGTGACTG CTGTGATGCT GTATTTTCTC GCGCCGAATG TCGCCGTACC GCAAAATGCC
AGCCCGAAAA AAGAGCTGCA AACACTGAAG AACCGTGAAG TTTGGCTCAC GCTCGGCATT
GCGGCTATCG GTTTTGGCGG GATTTTCTGT GTGTATACCT ATCTGGCCGA GACGCTGATC
CAAGTCACCC AAGTCGAGCC CTTTAAAATC CCGGTGATGA TTGCGGTCTT TGGAATTGGC
GCCACCTTGG GCACTTTAGT CTGTGGCTGG GCGGCGGATA AGTCGGCGCT GGCGGCGGCA
TTTTGGTCGC TGGTGTTAAG CACCTTAGTG TTGGCGCTGT ATCCGAGTTT GACGGGATCT
TATTGGGCAT TAATGCCGAT TGTATTCTTT GTGGGTTCGG GGATTGGTCT AGCAACCATA
GTACAGGCGC GATTAATGGA TGTGGCCCCC GATGGGCAAG CCATGACGGG CGCCTTAGTA
CAATGTGCCT TTAACCTTGC CAATGCGATT GGCCCATGGG TTGGCAGCTT AGTGATCTTA
TCAGGCCAAG GCATCGCCGC GACTGGCTAT GCCGCAGCGC TGTTATCCCT CGGTGGTTTA
GTCATGTGGT GGTTAACCCA TAGGGAGAGT CGCCGCGCTG ATAATCTTTG TACTGCAAAC
TGCATTGATT AA
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| Protein sequence | MQAVQPQTQA QSSALWVLLA LALGTFALGT TEFAAMTLVP YIASDLSVDV AHVSYAISAY
ALGVVVGSPI IMVLGVRIKR RTLLIALAAM MAVANGLSAL APSLNWLVFF RFLSGLPHGA
YFGVAMLLAA SLVPPDMKAR AVSRVIIGLT LATIVGVPFA TWMGQTVGWR SGIGIVAIIA
AVTAVMLYFL APNVAVPQNA SPKKELQTLK NREVWLTLGI AAIGFGGIFC VYTYLAETLI
QVTQVEPFKI PVMIAVFGIG ATLGTLVCGW AADKSALAAA FWSLVLSTLV LALYPSLTGS
YWALMPIVFF VGSGIGLATI VQARLMDVAP DGQAMTGALV QCAFNLANAI GPWVGSLVIL
SGQGIAATGY AAALLSLGGL VMWWLTHRES RRADNLCTAN CID
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