Gene Shewmr4_0489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0489 
Symbol 
ID4250913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp561684 
End bp562127 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content52% 
IMG OID638117048 
Productrhodanese domain-containing protein 
Protein accessionYP_732626 
Protein GI113968833 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATA AAGCGATTCG ACACAGCCTA TTAGGCGGCT TACTGGCGCT GGGCCTAGGT 
GGCATGAGTT TACCCGTCGT GGCTGGTGGT GGCTCTGAGA TCTCCGAGGC GCCCTATAAC
GAAATTCAGT TGAATCCGAT TTCCATGCGG GAAGCCGAAA CCTTAGTCGG CAAGCCAGGG
GTGTATTTTT TCGATGTAAA CACGCTGGAA ATCTGGGCGG ATGGTTTTAT CCCCGGAGCG
GTGTTTTTCA ATGTGCAGAA TTGGCGAGAT CTACTGCCAA AGAATAAAGA CGCTGTGATG
GTGTTCTATT GCGCTAACCG TCTTTGTACC GCCAGCAACA TGGCCGCACG GGAAACCATG
AAGCTAGGTT ACACAGGTGT GCGCCACATG GCCGATGGCA TCTTCGGCTG GCGCATGTCA
GGCAGAACAA CAGAAAAACC ATAG
 
Protein sequence
MMNKAIRHSL LGGLLALGLG GMSLPVVAGG GSEISEAPYN EIQLNPISMR EAETLVGKPG 
VYFFDVNTLE IWADGFIPGA VFFNVQNWRD LLPKNKDAVM VFYCANRLCT ASNMAARETM
KLGYTGVRHM ADGIFGWRMS GRTTEKP