| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0427 |
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| Symbol | pdhR |
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| ID | 4251901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 474586 |
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| End bp | 475338 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638116986 |
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| Product | transcriptional regulator PdhR |
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| Protein accession | YP_732564 |
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| Protein GI | 113968771 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.988139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCTATA GTAAAATTAA TCAGCCAAAA ATTTCTGATG TGATCATGGC GCAACTCGAG
CAGATGATCC TCGAAGGCAG TTTACAGCCG GGTCAGAAAT TACCGCCGGA GCGCGAACTG
GCCATCCAGT TTGAAGTGTC TCGCCCTTCA CTGCGTGAAG CCATTCAAAA GCTTGAGGCG
AAAGGGCTGT TAATGCGCCG TCAAGGCGGC GGTACTTATG TCAAAGAACA ACTCTGGCAG
AGCCTTGCCG ATCCTATCGT TGAATTAATG ACTGCCGATC CAGAAAGCCA ATACGACTTG
CTGGAATTCC GTCATGCAAC CGAAGGCATG ATGGCCTATT TTGCCGCCCT GCGTGGCACA
GACGCCGATA TGCAGAATAT CAAGCGTATG ATCCTTGAGG TGGAAGCCGC CACCAATATC
GAACAACAAG CCGCCGCGAT TGTGCGTTTC TATCGCGCCG TCGCCGAAGC GTCACACAAT
GTGGCTATGT TGCATCTCGT ACTCAGTTTA ACCCCTGTGC TGCATAAGAA TGTGGCGCAA
AACCTGGAGC TTTTAAGCCG CCGCGAAGAA GCCTCCACTA TGGCCAACGA TCACAGACGT
GCTCTGCTCG CTGCTATCGT TCGTCGTGAT CCTGAAGCCG CCAGAGAAGC CTCGAATGAA
CACTTAAGTT ACATCGAAGA GGTGATGTTA TCTGTGCGGG AAGAAGATAG CCGGTTGCAG
CGAAGTTTGC GCCGTTTAAA GAGTGGCGCT TAA
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| Protein sequence | MAYSKINQPK ISDVIMAQLE QMILEGSLQP GQKLPPEREL AIQFEVSRPS LREAIQKLEA
KGLLMRRQGG GTYVKEQLWQ SLADPIVELM TADPESQYDL LEFRHATEGM MAYFAALRGT
DADMQNIKRM ILEVEAATNI EQQAAAIVRF YRAVAEASHN VAMLHLVLSL TPVLHKNVAQ
NLELLSRREE ASTMANDHRR ALLAAIVRRD PEAAREASNE HLSYIEEVML SVREEDSRLQ
RSLRRLKSGA
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