Gene Shewmr4_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0301 
Symbol 
ID4251915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp321742 
End bp322875 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content46% 
IMG OID638116856 
Producthypothetical protein 
Protein accessionYP_732438 
Protein GI113968645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0578394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.132652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA AATCCACCCG GTTTATGTTG TCCATGGTGG CAACCGCTAT CGCACTATCT 
CAAACTAACG CCTTTGCCGC AGAGCAAGAA GATGGCATCA ATGTTGGCGG CGCCGTGCGC
GTTAACTATG GCTATCGCGA TTATGATGAA AAATCGAAGG ATAAAGGCGG CGACTTTAAC
TTCGACATGG CCGCCATCAA ATTTGATGGT AAAAAAGGCG ATTTCGGTTT AGCGGCGGAA
TACCGTTTTA CCTCAGGCAC TAACTACATC AAGTATGGTT ATGGCTACTA CAACATTGAT
CCAGACTGGC AACTGCAATT TGGTATCAAC AAAGTGCCCT TTGGTAACCG CGAGTTTATC
TCTAACAGTT GGTGGTTTGG TCTGCCTTAC TATTTAGGCT TTGAAGATGA CCATGACATC
GGCTTAAAAG CGACCTATGA GAAAAACGGC TGGCACACGG ATTTAGCGTT TTATAAAAAT
GCCGAATACG GCCCAACCGA AAACAAGCGT TATTCAACTG ACTTGTATAC CGGCACCATC
AATGGCACTG AATACAACAA CGAAGAAACC AACCAACTCA ACGTGCGCCA AACCTACACC
GCCGAATACG AAGGTGGCGC AACCACTTTT GGTGGCTCAG TACAGGTCGG CCAAATCTAC
AACAGCAAAA CCGGTAATAA TGGCGACCGC TATGCTGTCG CACTGCATTT AGACAGCAGC
TACAACGGCT GGAGCCTACA AATGCAAGCC ATGCAGTATG AATACAATGC TGCAGATGCT
ATCGACGACA ACAAAATTGG CGTATCGGTG GTGAGCTGGC AGTACGAAAT CGCCTCAAAA
GGCCAAGCCT ATAACATCAA CATTGCCAAA ACGGTTAACA CAGATTGGGG CAGCATTAAG
TTCTATAACG ACTTTGGTTT AATGACACCT GATGTTGATG ACGATAGCTA CGACAACAGC
ATGCAAAACG TCACCGGTAT GGCGATTTCT GCTGGCCCAA CGTACACCAT GATTGACTTT
GTGATGGGTA AAAACATGAC TTTCTCAACC GCCAATAACG ACCACGTTGG CTTACCTGAA
GTCGGTAACG ATTGGGATAA ACGAATCAAC ATTAACTTTG GTTACTACTT CTAG
 
Protein sequence
MMKKSTRFML SMVATAIALS QTNAFAAEQE DGINVGGAVR VNYGYRDYDE KSKDKGGDFN 
FDMAAIKFDG KKGDFGLAAE YRFTSGTNYI KYGYGYYNID PDWQLQFGIN KVPFGNREFI
SNSWWFGLPY YLGFEDDHDI GLKATYEKNG WHTDLAFYKN AEYGPTENKR YSTDLYTGTI
NGTEYNNEET NQLNVRQTYT AEYEGGATTF GGSVQVGQIY NSKTGNNGDR YAVALHLDSS
YNGWSLQMQA MQYEYNAADA IDDNKIGVSV VSWQYEIASK GQAYNINIAK TVNTDWGSIK
FYNDFGLMTP DVDDDSYDNS MQNVTGMAIS AGPTYTMIDF VMGKNMTFST ANNDHVGLPE
VGNDWDKRIN INFGYYF