| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0267 |
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| Symbol | |
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| ID | 4251163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 286831 |
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| End bp | 287670 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638116822 |
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| Product | ribokinase-like domain-containing protein |
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| Protein accession | YP_732404 |
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| Protein GI | 113968611 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00045197 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAAATA TTTTGCTGGT GGCCAATCTT AACTGTGACC GAGTGTTGAT CCTTGATAAA
CCATTGAAAA CGGGCGGTCG CTTTCATTAT CAAGATGGCG GACAAAGGCT CGGCGGTGGC
GGCGCTAATA CCGGGCTTGG GCTGGTGTGG GCGGGCCATA GGGTTGCACT CGTGAGCCAA
GTCGGGCGGG ATGAAATGGG CGATTGGGTT ATTGCTGAGG CGAGTACTCA GGGACTCGAT
TGTCGTTTAG TGCAGCGCCG CGCGGGAAAT ACCTGTGAAA TGTTACTGGT GATGACACCC
GACGGTGAGC GCACCATCAT TCGTCCGCAG CGTCCGGTTT TTGAATTAGC AGTGCCGCCC
AAATGGCAAC ATTGGGATGC GCTGTATTTT AATACCTCGG CTGAGGGCAC GGTTAGTTGG
GCGAAAACCG CGCTGGATCA TTGTCTTGTC GTGGCGCAAC TGGCGAAGGA TGACAGACCT
CGTCCTTGCC ACGTGTTGCT TGCGTCAGTG AGTGATATGC AAGGCCGCTG TGATGTCGCC
TCATGGGATT ATGGCGTGAG TATCGGTGGT GAATCGCTAC GCTATTTTGT GGTGACTGAT
GGTGTACGCG GCGCTAAGGT TTATACCCAA AATGATGTTC AGCATGTGCC CGCAGTGCCA
GCTGAAGTGG TTGATACCAC AGGTGCTGGA GATGCCTATG CCGCAGGGCT TATCCATGGA
CTCTGCGCGG GTAAAACCAT TACCGAAGCC ATGGCCGAAG GCGCGATTTG GGCAGCATTT
GCCGTGGCCA CCGACAGCTC TATCCCCGGT GAAGCATTGA AACACTATTT AGAAGGTTAG
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| Protein sequence | MANILLVANL NCDRVLILDK PLKTGGRFHY QDGGQRLGGG GANTGLGLVW AGHRVALVSQ
VGRDEMGDWV IAEASTQGLD CRLVQRRAGN TCEMLLVMTP DGERTIIRPQ RPVFELAVPP
KWQHWDALYF NTSAEGTVSW AKTALDHCLV VAQLAKDDRP RPCHVLLASV SDMQGRCDVA
SWDYGVSIGG ESLRYFVVTD GVRGAKVYTQ NDVQHVPAVP AEVVDTTGAG DAYAAGLIHG
LCAGKTITEA MAEGAIWAAF AVATDSSIPG EALKHYLEG
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