| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0256 |
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| Symbol | |
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| ID | 4250820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 274640 |
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| End bp | 275197 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638116812 |
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| Product | OmpA domain-containing protein |
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| Protein accession | YP_732394 |
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| Protein GI | 113968601 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.912099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000341741 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAC TATCTTTAGT TGCGGTAACT TTATTATCTG CATTAGTAGC CGGCCAAGCT
TCAGCGGCAA CCGATAATAC TGGGTTTTAT GTGGGTGGCG CACTAAACCG TGTAACTGTG
GACGCTTTTG ATGACTCAGA AACTGGCACA GGTTTTGGTG TTTACGGTGG TTACAACTTC
AACGAGTGGT TTGGTTTAGA AGCCAATTTT TTTGCAACGG CTGATTTGGG TGACAGTGAT
GTCGACATCT CCGCTGGTGC ATTAACCTTC ACTCCTAAGT TTACGCTGCA AATCAATGAT
ATGTTTTCTG CCTATGCCAA AGTAGGTGTT GCATCTATGG CTGTGAATGT TGACGGTTTG
GGTTTCGATG AAGACTTTAC TGGCTTTGGC TGGACGTACG GCGTTGGTGT TAATGCTGCC
GTGACCGAAC ATTTAAATGT TCGCTTAAGT TACGATATCA CCACGGGTGA TTTAGACGCC
GATCACAGTT ATTTAAATAT GAAAGATATC GACACAGATA TGAAACAATT AGCAATTGGT
GTGCATTACC AGTTCTAA
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| Protein sequence | MKKLSLVAVT LLSALVAGQA SAATDNTGFY VGGALNRVTV DAFDDSETGT GFGVYGGYNF
NEWFGLEANF FATADLGDSD VDISAGALTF TPKFTLQIND MFSAYAKVGV ASMAVNVDGL
GFDEDFTGFG WTYGVGVNAA VTEHLNVRLS YDITTGDLDA DHSYLNMKDI DTDMKQLAIG
VHYQF
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