| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0248 |
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| Symbol | |
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| ID | 4250812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 265526 |
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| End bp | 266287 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638116804 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_732386 |
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| Protein GI | 113968593 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000114763 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACACAA CTCCCATCGC GCTGATCACC GGTGCAAGCC GTGGCTTAGG TAAAAATGCG
GTCCTGACCT TAGCCGCACA AGGTGTTGAT ATTATTCTAA CTTACCAAAG TAATGCTGCA
GCGGCCGCCG AGGTGGTTGC GGAAATTGAA TGGCACGGAC GCAAGGCTGT CGCGTTACCG
TTAGATGTGG GTAATAGCCA GTCCTTTAGT GATTTTTCTC AACGCGTTAA AACCGCACTC
GAACAGACTT GGCAGCGAGA TAGTTTTAAC TATCTAGTTA ATAATGCTGG GATTGGTATC
CATGTGCCCA TGGCTGAAAC CAGTATGGAG CAGTTCGATA CTTTGATGAA TATTCATGTC
AAAGGACCTT TCTTCTTAAC TCAGGCTTTG CTGCCTCTGC TTGCCGATAA TGGCAGTATC
ATCAATGTCT CTACGGGGTT AACGCGCTTT GCTGTTCCGG GATTTGGTGC CTACGCCACT
ATGAAAGGCG CGGTCGAAAC CATGACCAAA TACTGGGCGA AGGAGCTTGG TCCACGCGGC
ATTCGCGTTA ATGTGCTGGC TCCCGGTGCA ATCGAAACGG ACTTTGGTGG TGGTGCCGTC
CGGGATAACC GACAGATGAA TGAGTTTTTA GCGCAGCAAA CGGCGTTGGG GCGGGTGGGA
TTACCCGAAG ATATTGGCGG AGCAATCAGT GTCTTGTTGT CACCCGCCGC GGCGTGGATA
AACGCACAAC GTATCGAGGC ATCTGGCGGT ATGTTCTTAT AG
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| Protein sequence | MNTTPIALIT GASRGLGKNA VLTLAAQGVD IILTYQSNAA AAAEVVAEIE WHGRKAVALP
LDVGNSQSFS DFSQRVKTAL EQTWQRDSFN YLVNNAGIGI HVPMAETSME QFDTLMNIHV
KGPFFLTQAL LPLLADNGSI INVSTGLTRF AVPGFGAYAT MKGAVETMTK YWAKELGPRG
IRVNVLAPGA IETDFGGGAV RDNRQMNEFL AQQTALGRVG LPEDIGGAIS VLLSPAAAWI
NAQRIEASGG MFL
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