Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0246 |
Symbol | |
ID | 4251020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 263986 |
End bp | 264474 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638116802 |
Product | hypothetical protein |
Protein accession | YP_732384 |
Protein GI | 113968591 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000895819 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAGCCGA TAACAGCCTT CACACTGCGA GTGTCCGATA GCGAGGCGCT CACTCAGCCT TTGTATTTCA ATGAGCAAGC TACAGGGGCC AAGATTGCGG GAAGGCAGCT TGAGGCCCAG TACCGCTGCA CTTTACCCAA TGGCTCCCAA GGCTATTTAC TGTTGACCTC CTACGATTGT CCCTTTGAAG AATCGACCGA GTGCAGCCTG CTCGATACAT CCTTTAAATT AGTGGCGAGT CGCTCCCTCT CGCAGAGTTA TCATTCGTTT TTACTCTATG CCCATTGGCC TGTTGCGGAT AATGGCCTGC GGCTGCATTA CTACGATCAG TTAGTTTGGG ATTTGCATGT TCTGCCAAGC CGTTTAGGTC GGTTCGGGGG GCCGCGTCTC GAATTTAGCC CAGTAGCCAA TCCTGAGTGC GATCCCCGCA CCACAAGCTC GATGGCACAA CTGTCGCAGC GGTTAGCGAA TATCGAGACT GACCGTTAA
|
Protein sequence | MQPITAFTLR VSDSEALTQP LYFNEQATGA KIAGRQLEAQ YRCTLPNGSQ GYLLLTSYDC PFEESTECSL LDTSFKLVAS RSLSQSYHSF LLYAHWPVAD NGLRLHYYDQ LVWDLHVLPS RLGRFGGPRL EFSPVANPEC DPRTTSSMAQ LSQRLANIET DR
|
| |