| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0245 |
|---|
| Symbol | |
|---|
| ID | 4251019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 263535 |
|---|
| End bp | 263957 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638116801 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_732383 |
|---|
| Protein GI | 113968590 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0000864712 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTCC ATCTTTTTAG CCGTCAGCCC GATCGAAAAT CTTTTTTAAT TTATGCGGTG
CTGCTGTTTA TCATTGAAGT GTTGATCGCG CGTTTTGTGC CTTCGGGGTT TATTCGTGGT
TTTGTCGGTG ACGTGTTAGT GGTGATCCTG TTGTTTTGCA TGGCGCGCAC GCTAGTGCCC
GTGGTGAATG CAAAAGGGGA ATCAATCAAT CGGTTTTGGC ACACGCCATG GTTGGCGCTG
GCTGTGCTGC TGTTTGCCTT CGGTATCGAA TTTGGCCAGT ATTGGGGCTT AGTGGACAAG
CTGGGGTTAG GCGGCAATCG TTTGGCGCGA ATCGTGATTG GTAGCCATTT CGACCCACTC
GACTTGCTGG CGTATTTTGT GGGATACCTG ATATTGATGG GCTTGTATTG GAAGCGAAAT
TAG
|
|---|
| Protein sequence | MPVHLFSRQP DRKSFLIYAV LLFIIEVLIA RFVPSGFIRG FVGDVLVVIL LFCMARTLVP
VVNAKGESIN RFWHTPWLAL AVLLFAFGIE FGQYWGLVDK LGLGGNRLAR IVIGSHFDPL
DLLAYFVGYL ILMGLYWKRN
|
|---|
| |