Gene Shewmr4_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0242 
Symbol 
ID4251016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp261646 
End bp262209 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content49% 
IMG OID638116798 
Productdiheme cytochrome c 
Protein accessionYP_732380 
Protein GI113968587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000305217 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTAAAC AAGCCCATCC CCTAAGCTGG ATTGCCGGAA CCACACTCAC CGTCCTCGCC 
CTTGCGATAG GTGCCGTAGG GCTCAGCTTA ACCTTTACTG GCACAGGTTA TGCCCACGAT
GGCTTCGAAC ATAATCAAGC CATCCCACAA AATGCAGAAT ATTCAGCAGA ATGCGGTAGC
TGCCATATGG CGTATCCCGC AAATCTACTG CCCGCCGAAA AGTGGCAGGC AATTACCAGC
AACCTAAGCA ACCACTTTGG TGATGATGCC AGTCTGTCGC CTGAAGCAAC GGCTAGAATT
GAGCAATATC TCGTTCAACA TGCTGCACAA AATGGTAAGG TGATGAAAAA TAGCAAACCT
TTGATTGACG GCATCGGGCC GCAGAAAATT ACCGAGCAGG CATTTTTTAT CCGTAAGCAC
GATGAGATCC CAAGACGCAT GGTGCAAGAT AACCCCAAAG TCGGCTCATT CAGCCAATGC
AGCAATTGCC ATAACCTCGC AGAGAAGGGC ATATTCGATG AAGATACCGT TAATATTCCT
GGCTTTGGCC GCTGGGATGA TTAA
 
Protein sequence
MTKQAHPLSW IAGTTLTVLA LAIGAVGLSL TFTGTGYAHD GFEHNQAIPQ NAEYSAECGS 
CHMAYPANLL PAEKWQAITS NLSNHFGDDA SLSPEATARI EQYLVQHAAQ NGKVMKNSKP
LIDGIGPQKI TEQAFFIRKH DEIPRRMVQD NPKVGSFSQC SNCHNLAEKG IFDEDTVNIP
GFGRWDD