Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0242 |
Symbol | |
ID | 4251016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 261646 |
End bp | 262209 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638116798 |
Product | diheme cytochrome c |
Protein accession | YP_732380 |
Protein GI | 113968587 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000305217 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTAAAC AAGCCCATCC CCTAAGCTGG ATTGCCGGAA CCACACTCAC CGTCCTCGCC CTTGCGATAG GTGCCGTAGG GCTCAGCTTA ACCTTTACTG GCACAGGTTA TGCCCACGAT GGCTTCGAAC ATAATCAAGC CATCCCACAA AATGCAGAAT ATTCAGCAGA ATGCGGTAGC TGCCATATGG CGTATCCCGC AAATCTACTG CCCGCCGAAA AGTGGCAGGC AATTACCAGC AACCTAAGCA ACCACTTTGG TGATGATGCC AGTCTGTCGC CTGAAGCAAC GGCTAGAATT GAGCAATATC TCGTTCAACA TGCTGCACAA AATGGTAAGG TGATGAAAAA TAGCAAACCT TTGATTGACG GCATCGGGCC GCAGAAAATT ACCGAGCAGG CATTTTTTAT CCGTAAGCAC GATGAGATCC CAAGACGCAT GGTGCAAGAT AACCCCAAAG TCGGCTCATT CAGCCAATGC AGCAATTGCC ATAACCTCGC AGAGAAGGGC ATATTCGATG AAGATACCGT TAATATTCCT GGCTTTGGCC GCTGGGATGA TTAA
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Protein sequence | MTKQAHPLSW IAGTTLTVLA LAIGAVGLSL TFTGTGYAHD GFEHNQAIPQ NAEYSAECGS CHMAYPANLL PAEKWQAITS NLSNHFGDDA SLSPEATARI EQYLVQHAAQ NGKVMKNSKP LIDGIGPQKI TEQAFFIRKH DEIPRRMVQD NPKVGSFSQC SNCHNLAEKG IFDEDTVNIP GFGRWDD
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