| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0155 |
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| Symbol | |
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| ID | 4250877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 176740 |
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| End bp | 177666 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638116698 |
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| Product | general secretion pathway protein C |
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| Protein accession | YP_732293 |
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| Protein GI | 113968500 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3031] Type II secretory pathway, component PulC |
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| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0113591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAT TAGATAAAGT TATCGCTAAA GCTGCAGGTA TTCCGCATAA GCCATTGAGC
CAGATTGTTT TCTGGTTTGG TTTTATTCTG AGTTTACTCT TAGCTGCGCA AATTACATGG
AAACTCGTGC CTACCACATC CTCTCCTACT GCCTGGTCGC CAACGGCTGT GACAACGACC
GGAAAAGGTG CTGGCCAAAT TGATATGGCA GGATTGCAAC AGCTTGCACT TTTCGGCAAG
GCCGATGCCA AATCGGATAA ACCTAAGGTG GAAGTGGTTG AGACAGTGAC CGATGCGCCT
AAGACTTCCC TCTCTATTCA ATTAACCGGT GTGGTGGCCT CGACCGCCGA TCAAAAAGGT
CTCGCCGTTA TCGAGTCTAG CGGCAGCCAA GAAACCTACA GCCTAGGCGA TAAGATCAAA
GGCACTTCTG CTTCGTTAAA AGAAGTCTAT GCCGACCGGA TTATCATCAC CAACGCGGGC
CGTTACGAGA CACTGATGCT CGATGGTCTG GTTTACACCA GCCAAAGCCC CGCGAATCAG
CAATTACAGA AGGCTAAGAG TGAAAAGGCC GAAGTGGTTA GCCGCGTTGA TCAACGCAAA
AATACTGAAA TCTCCCAAGA GCTGGCCGAA TCCCGCAGCG AACTCTTAGC CGACCCCAGC
AAAATTACCG ATTACATCGC GATTTCTCCT GTTAGACAGG GCGAAAACGT CGTGGGCTAC
CGTTTAAACC CGGGTAAAGA TGTGAACCTT TTTAAGCAAG CGGGCTTTAA ACCCAATGAC
CTTGCTAAAT CGATTAATGG ATACGACCTG ACTGTGATGA GTCAGGCGTT AGAAATGATG
AGCCAATTAC CTGAATTAAC TGAAGTTTCC ATCATGGTTG AGCGGGAAGG TCAATTGGTT
GAAATCATGT TTAGTTTGCC GCAATAA
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| Protein sequence | MDLLDKVIAK AAGIPHKPLS QIVFWFGFIL SLLLAAQITW KLVPTTSSPT AWSPTAVTTT
GKGAGQIDMA GLQQLALFGK ADAKSDKPKV EVVETVTDAP KTSLSIQLTG VVASTADQKG
LAVIESSGSQ ETYSLGDKIK GTSASLKEVY ADRIIITNAG RYETLMLDGL VYTSQSPANQ
QLQKAKSEKA EVVSRVDQRK NTEISQELAE SRSELLADPS KITDYIAISP VRQGENVVGY
RLNPGKDVNL FKQAGFKPND LAKSINGYDL TVMSQALEMM SQLPELTEVS IMVEREGQLV
EIMFSLPQ
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