| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0139 |
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| Symbol | |
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| ID | 4250632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 157532 |
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| End bp | 158434 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638116682 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_732277 |
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| Protein GI | 113968484 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.145466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAA CTCATCTATT TTCACCTAAT ACTTATCGAA GGCGGATGAC TATGCAGGTT
TCATTACAAG CGTTAAAAGC ATTTGAAGCA GCAGCCAGAC TCGGCAGCTT TAAATTGGCA
GCGCTAGAGT TATCACTATC ACCGACCGCA ATATCGCACC ATATCAACAA TCTAGAACAG
CGCTTGGATG TCGCGCTCTT TCAACGCCAA GCCAGACGCA TTAGTTTAAC GCCGGCTGGT
GAGCGTTTAT CCACCGTGAC CACTCAAGGA TTTCAGGCCA TAAATCAAAC CTTGGACGAT
ATCGCGAGTA CTGGACGCCA TATTAAGGTC GCCACCACAT CGTCACTTGC AGCATTGGTA
CTGATACCCG CACTACAACA GTTTTACGCG ACTTACCCAC AAACCCAAGT TGAAGTCGCG
ACAGGCGAAG ATATGCAGCA TGATGCCTTT ACACTGCCGC TGCGCTTTGG GGATCTGCGC
CATCAACATC CTGATGATGT ATTAAAAACA GAGTTCTTTA ATATGTTTGC TACACCAGCG
GCTGCATCAT TGCCAGCAGG TCCTAAACCT CTGACCATAT ACACAACAAG GTGGAAAAAT
AATAACTTAC CACCACCGCC GCTAACGGAC TGGTTGGCAC AGCAAGGCTT GCAAGACTCT
AGATTGGATA TCAAATATTA TGATCAGGAG TTGTTTGGTA TTCAGCAGGC GCTCGCAGGG
CAAGCTTGGG TATTTAGCTC TACCACGCTC ACCCAACAAT ATGTACAGGC TGGGATATTG
CAAGCCGTTA ACCCTAACGC TGTAAAATCA GCGCTTTGCT ATTACATCCC CAATAAAGCC
CTACTAAGCA ATCGGCATAA CGCACACTTT ATTGACTGGC TACAAGCAAC CTTAAATACA
TAA
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| Protein sequence | MSQTHLFSPN TYRRRMTMQV SLQALKAFEA AARLGSFKLA ALELSLSPTA ISHHINNLEQ
RLDVALFQRQ ARRISLTPAG ERLSTVTTQG FQAINQTLDD IASTGRHIKV ATTSSLAALV
LIPALQQFYA TYPQTQVEVA TGEDMQHDAF TLPLRFGDLR HQHPDDVLKT EFFNMFATPA
AASLPAGPKP LTIYTTRWKN NNLPPPPLTD WLAQQGLQDS RLDIKYYDQE LFGIQQALAG
QAWVFSSTTL TQQYVQAGIL QAVNPNAVKS ALCYYIPNKA LLSNRHNAHF IDWLQATLNT
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