| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0101 |
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| Symbol | |
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| ID | 4250980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 113109 |
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| End bp | 113690 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638116643 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_732239 |
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| Protein GI | 113968446 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAC GCCAGTTTTT TAAACTGTGT GCGGCCGGAG CGGCAACCTC AGCGATTTCA
GCGCTGGGAT TGATGTCCGA AAAGGCCTAT GCAGCAGTGC GAGAGTTTAA GCTGATCGGA
GCCAAAGAAA CCCGTAACAA CTGTCCGTAT TGCTCGGTCG GTTGTGGCCT GCTGATGTAC
AGCCAAGGCA GTGGGGGCAA AAACTCTGAG CATGCTATTT TCCATATCGA GGGTGATGCC
GATCATCCAG TAAACCGAGG TGCATTGTGC TCTAAGGGTG CAGGCCTTGT GGATTATGTT
AACAGTCCAC ACCGTTTACA GTATCCAGAA TATCGCGCCC CCGGCAGCAA CAAGTGGGAA
CGGATCAGCT GGCATGATGC CTTTAAACGT ATTGCTCGTT TAATGAAAGA TGACCGTGAT
GCGAACCTAA TTGAGAAAAA CGCCGATGGC GTAACGGTTA ACCGTTGGTT AACCACAGGG
ATGATGACCT CATCCGGTAT GGCCAATGAA AGTGGCTTAG CGACACAAAA ATTTGCGCGC
GCTTTAGGCC TAGTGGCTAT CGATACTATT GCACGTAACT GA
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| Protein sequence | MNRRQFFKLC AAGAATSAIS ALGLMSEKAY AAVREFKLIG AKETRNNCPY CSVGCGLLMY
SQGSGGKNSE HAIFHIEGDA DHPVNRGALC SKGAGLVDYV NSPHRLQYPE YRAPGSNKWE
RISWHDAFKR IARLMKDDRD ANLIEKNADG VTVNRWLTTG MMTSSGMANE SGLATQKFAR
ALGLVAIDTI ARN
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