Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4900 |
Symbol | |
ID | 4246554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 7485702 |
End bp | 7486523 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638109721 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_724297 |
Protein GI | 113478236 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTG CAATTATTGG TTGTGGTTAT GTAGGCAGTG CAGTTGCCAA GTTGTGGAGT CAGAAAGGTC ATAAAATGAT TATAACTACT ACTACTCCTG AAAGAGTTTC AGAATTACAA AATATAACAC AACAAGTAGT AGTAATGAAA GGCAATGACT TTAACGCAAT GAAGGATGTA TTGCAAAATC AAGAAGTAGT ATTGTTGAGT GTAGGCGATC GCTATCGTAC TGGGTACAAA CAAACTTACC TAGAAACTGC CGAAACTCTC TTAACTGCCT TAAAAAAAAC TCCTACTGTC AAACAAATAA TTTATACAGG TAGTTACTCA GTTTATGGTG ATAAAAATGG TGAGTGGGTA GATGAAAATT CTTCTGTTAC CCCTGCTACT GAAGGTGGAA AAATTCTCCA TGAAACTGAG CAGGTGTTAT TATCGGCATC CACTCCCCAG CAACGAGTGT GTATCCTGCG TTTAGGAGGA ATTTACGGAC CAGGTCGGGA GTTAGTGAAA ATTTTTAGTA GGTGGGAAGG CCAAACTCGC CCCGGCAGTG GGAATGATGT CACAAACTGG ATTCATTTAG ATGATATTGT GGAAGCATTG GAGTTTGCTA AGAAGAAACA GTTGCAGGGT ATTTACAATT TGGTGAATAA TGTACCGATG ATAAGTCGAG AATTACTTGA TGGTTTACAC AAATATCAGG GTTTAGGACA GATTTATTGG GATGACTCCA CTTTTTCAAC ACGTCCTTTT AATGCTAGGG TATCAAATCA AAAATTGAGA AATGAAGGTT TTGAGTTAGT TCATCCCGAA ATTGTCTTTT GA
|
Protein sequence | MKIAIIGCGY VGSAVAKLWS QKGHKMIITT TTPERVSELQ NITQQVVVMK GNDFNAMKDV LQNQEVVLLS VGDRYRTGYK QTYLETAETL LTALKKTPTV KQIIYTGSYS VYGDKNGEWV DENSSVTPAT EGGKILHETE QVLLSASTPQ QRVCILRLGG IYGPGRELVK IFSRWEGQTR PGSGNDVTNW IHLDDIVEAL EFAKKKQLQG IYNLVNNVPM ISRELLDGLH KYQGLGQIYW DDSTFSTRPF NARVSNQKLR NEGFELVHPE IVF
|
| |