Gene Tery_4900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4900 
Symbol 
ID4246554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7485702 
End bp7486523 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content38% 
IMG OID638109721 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_724297 
Protein GI113478236 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG CAATTATTGG TTGTGGTTAT GTAGGCAGTG CAGTTGCCAA GTTGTGGAGT 
CAGAAAGGTC ATAAAATGAT TATAACTACT ACTACTCCTG AAAGAGTTTC AGAATTACAA
AATATAACAC AACAAGTAGT AGTAATGAAA GGCAATGACT TTAACGCAAT GAAGGATGTA
TTGCAAAATC AAGAAGTAGT ATTGTTGAGT GTAGGCGATC GCTATCGTAC TGGGTACAAA
CAAACTTACC TAGAAACTGC CGAAACTCTC TTAACTGCCT TAAAAAAAAC TCCTACTGTC
AAACAAATAA TTTATACAGG TAGTTACTCA GTTTATGGTG ATAAAAATGG TGAGTGGGTA
GATGAAAATT CTTCTGTTAC CCCTGCTACT GAAGGTGGAA AAATTCTCCA TGAAACTGAG
CAGGTGTTAT TATCGGCATC CACTCCCCAG CAACGAGTGT GTATCCTGCG TTTAGGAGGA
ATTTACGGAC CAGGTCGGGA GTTAGTGAAA ATTTTTAGTA GGTGGGAAGG CCAAACTCGC
CCCGGCAGTG GGAATGATGT CACAAACTGG ATTCATTTAG ATGATATTGT GGAAGCATTG
GAGTTTGCTA AGAAGAAACA GTTGCAGGGT ATTTACAATT TGGTGAATAA TGTACCGATG
ATAAGTCGAG AATTACTTGA TGGTTTACAC AAATATCAGG GTTTAGGACA GATTTATTGG
GATGACTCCA CTTTTTCAAC ACGTCCTTTT AATGCTAGGG TATCAAATCA AAAATTGAGA
AATGAAGGTT TTGAGTTAGT TCATCCCGAA ATTGTCTTTT GA
 
Protein sequence
MKIAIIGCGY VGSAVAKLWS QKGHKMIITT TTPERVSELQ NITQQVVVMK GNDFNAMKDV 
LQNQEVVLLS VGDRYRTGYK QTYLETAETL LTALKKTPTV KQIIYTGSYS VYGDKNGEWV
DENSSVTPAT EGGKILHETE QVLLSASTPQ QRVCILRLGG IYGPGRELVK IFSRWEGQTR
PGSGNDVTNW IHLDDIVEAL EFAKKKQLQG IYNLVNNVPM ISRELLDGLH KYQGLGQIYW
DDSTFSTRPF NARVSNQKLR NEGFELVHPE IVF