| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4447 |
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| Symbol | |
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| ID | 4246100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 6852048 |
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| End bp | 6857684 |
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| Gene Length | 5637 bp |
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| Protein Length | 1878 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638109330 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_723907 |
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| Protein GI | 113477846 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.516196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTATTC CCTCTATCAG TCAGGTTATT AATTACCATC CCCTTACTGC TACGGCAGAA
ACTGCTGTAG AAGATATAAT TATTTCCATG AGTAGTACAG GTTCAAGTTG TGTACTAATT
ACAGAAAAAC CATCTTTTTC TACTTCTATA AAAATAGTGA CTCCAGGCGA TCGCAGTCCT
GGATCCCCAA AGGGAAATCA TCATTCCAAT TCTCCAGATG CAAAGCTACA ATATTTAGGG
CCAGTTATTG GTATATTTAC TGAGGGAGAC TTAGTGCAAT TAGCCTCTAT TGGAGCTCCT
CTAAGTGGGT TTCCAATTGC TCAAATTATG ATTAGATCTA TAGTAACAGC ACAACTATCA
GAAATTCCAG ATATCTTTGC TCTGTTCGCA CTATTTGAAA AACATAAAAT CAACCATCTA
CCAATTGTTG ATAACTTAGA GAGACTTATA GGTCTAATTA CTGGTCACAG TTTTCTTTTA
AATCTGAACA ATATCAAAAA AAAGGGTGAA AAATCAATCC TCTCAAGAAA GAAAATTAAG
AGTCAACAAA AGTTATCTGC TAATCAAAAT AATACTGTAA ATAAAGGTTT AAAATCTGAG
AATAATTTAC TAAAAAATCC AAATAATCAA CTATTACCTC AAGAAATAAC CTTCGACTCA
TCTTTAGAGT TACCAGGCAA CTTTATCCCA ATTAATCACC TAGAAAAAAC CCATGAATCT
CAAGTTATTC AAGGTTCGTT TTCTTTGTCA ATCAAACAAA TTACCCAACT GATGTCTACC
CATAATGTGA GTTATGTTTT GATTATTGAA GCCACAGAAA AAAAATATCA AAATGAGACT
GATATTTATC TCAATCAAGA AAGTTCAAAT TCTCAAAAAT CAATCAAAAT TATAGGTACA
ATTAGTAGTA GAGATATAGT ACAACTACAG GCATTAAAAA TAGATTTTAA TAAAGTTAAA
GCGGGGATAG TTTGTAATAA ATCACCAATA GTAATAGGTT CTGATGTTAC CCTAGAATTA
GCTGTAGATT TGATCAACAA AAAATATTGC TTATTGCCCC TAATTGTGCA AAATTATATA
GGTAAAATTG ATTATTTTAT TAGTCCTACA AAAGTTATTC GGCAAATACT TCTAAATAAG
TCATTATATC AATCATTAAT TCGCTTTTAT AGTTATGTAG AAAAAACATA TTTAAAATTA
CATCAAGCTA ATAAAAAACT TAAGCAATAC ACCATTGAAC AGAACAATTT AGAAAAAAGC
CAACTAGCAG CGCCAGAAAC TACAGGCATA ACTCTAAAAT TAGATCAAGA TGGAATCTGG
GATTGGAACA TCGAAACTGG CGAAATTTTC TACTCGACTT TGGGGGAAAA AATGTTAGGT
TATACAGAAC ATGAAATTTC CCATAAAATT AGTTTTGATG AATGGTTAAG TCGAATTCAC
CCAGAGGATA GGGATAAAGT TAATACTGCT ATTCAAGAAC ACTTAACTAA AAAAAATACT
ATTTATAAAA TCAAATATCG GATTCAAGGT AAAGACAATA ATTTCATCTG GATTTTTGAT
AGTGGACAAA CTTTATGGAA ATCAGGAAAA CCAGTGAGAA TGGTAGGAAT TTTTGTTGAT
ATTACTAAGG AAAAAGAGGC AGAAATAAAA CAAAGTTTTC TAGTAGAAAA GCATATCCAA
ATAATTAATA ATTTGTCGGA AATAGTTTGG GAAACTGATA TTCACGGCAA CTTAATTTTT
TTAAATCAAG CATGGGAAAA AATCACTGGT TTTAAACCTA AAAATAGCTT GGGAAAAAAT
TTTTTAGACT ATATTCATCC AGAAGATATA AATAAGTTAA ATTTTCTTAC AAAAAATCAT
CCAGAAAATA CAGAGTTAGC TATTATTCAT AATAAATTAG TTGCAGATTC CTATCAATTA
CAGTTGTTAA CCAAAACGGG AGGCTATTGT CCAGTAAAAA TGAAGAGTAC ATTGGTATTT
GATAGGGAAA ACAAGGTTAC TGGTATAGTA AGTACTCTAA GTAATATTTC TGAGGATATT
GCCACCCAAC AACAATTACA AGCTAGTCAA AAAGCAATCA AAGAATTGTA TGAAGTGACT
ACAAATGCAG ATATTTCCTT TGAAAGCAAA ATAGTGGCAT TACTGGAAAT GGGATGCCAT
CGTTTTGGGA TGGATATAGG TTTATTAGGG CAAGTTTTAG GAGAACTTTA TAAAGTTATT
GCAGCTCATC TACCAGAAAA TTTTCTATTT GGAATAGCTG AAGGAGACAT TTTTACCCTG
GAACAAACAT TTGACCAGGA AGCATTACAA TACGATGAAC CCTTCGTTAT TGAATCAGCG
AAAAACTCAC AATGGCGACA TCATCCTGCT CACACAGTGC GTCATGTCGA GTCTTATATT
GGCACTAAAA TTTTGGCATC AGGAATAGTT TATGGTACTC TTAGTTTTTC CAGTCGTCTT
ACTAAGAATA AGTGGAGTTC TATAGATATA GAAGTTTTAA AACTAATGGC AAATTATATT
GGTGGTGAGT TGTTGCGAGA AGATGAGAGA AAAGCTTTAG AAAATAAATA TCAGCACTTT
TTATTACTTA AACAAATTAC CCAAGAAATT TGCTCGAAGT TAGATACTAA AGAAATTTTT
CAGACTACTG TTACTCAAAT TGGACGAGCA TTTAAAGTGA GCCGTTGTTT AATTCATAGT
TATGTTACTG AACCTGATTT ACATCTACCT TGTATGGCTG AGTATTTGGA AACAAACCAT
GAATCAATAT TGGGTTTAGA TCTGATTATT ACTTCTAATT ATTATACAGA AAAATTATTA
GGAGAAGACA GAGCGATCGC CTCTCCAGAT GTATTTTCAG ATCCTCTGTT AAATTCAGAT
GTACCGATGT ACCAGAAACT AAAAGTTAGA TCAATATTGG CAATTCGTAC CTCCTATCAA
GGAAAACCAA ATGGTATTAT TCATTTACAT CAATGTGATT ATATACGTCA GTGGAAACAG
GATGAAATAA GTTTATTAGA AGAGGTGGCA TTTCAGGTAG GATTAACATT AGCTAAAGCA
CAAATATTAG AGTCAGAAGT TACCCATAAA GAAGAATTAG AGGCTGAAAA TCAAGCCTTA
GAAAAAGCAC GAGAAGTAGC AGAAGTAAGG AACCGTGCTC AAGGGGAATT ATTAGCAATG
ATGAGTCACA AATCTCAGAC CAATATGAAT GATGTAATGA TGATGACAAG TTTGTTATTA
AGTATGAAAT TAAATCCTAA ACAAAGAGAT TTTGTGAAGA CTATTCTCGC CAGGGGAGAT
GTAGTAATAA ATATGATTAA TAATATTCTT GACTTTACTA AAATTAAATC TGGGGAAGTA
GAATTAGAAC TAAGTCCTTT GGATATTAGA GGCTGTGTTG AAGATCTGCT AAAATCATTA
GATATAATAG CAAAAAATAA AAAATTAGAA CTTGCTTATT TAATTGATAA AAATGTGCCT
AGAATAATTT TAACAGATGA TAAAAAACTG GTTAATATAT TGTTTAATTT ACTAAAAAAT
AGTATTAATT TCACAAAAAC AGGAGAAATA GTTGTTTATA TTAGTGCTAT AAAAAAATCG
GAAAAAAGTC AGGAATATAG TCAATTAGAA GCAATAAGTT ATGAGGAAAT ATCTGATTTT
AAAGGGGCTG GCAAAATCAC AGATAACTAT GAAATACAAT TTGCTGTTAA GGATACAGGT
GCTGGTATTC CTCTAGACCA AATAGATCAC TTATTTAAAG ATTTTTCTCA AGTGTCTCCT
GCCACGAATA GAGAATATGA TGGTTTAGGT TTAGGATTAG TTATTAGTCA AAGATTGAGT
CAAATGATGG GTGGTCAAAT GTGGGTAGTT TCTCAGCCAT TAGAAATTAA GAATTTGTCA
GAGGAAAAAA AACAAATATC TCTCTTAAAA ATTGAGGATA GTAGGGACAT TAATTTCCCA
AAAAATCCAA TAAATGTTTA TAATTCTAGT TCTCCTGAAT CTAAAGTAAA TATTGCCGGA
AATCCACCGC ATTACTTTGT TAAACCAGAA CTAAGTGGCA GAGGTTCAAT CTTTTATTTT
ACTATTCAAG CTAAGGCAAT TGCAATGTAT TCTCCGGAAA TAGTTGATGG TTTACTAAGA
GGTAAGAAAA TATTGGTTGT AGAAAGTAAT ATTATTAATC AAGAGGAAAT TAAACAGCAA
GTTAAGCAAT GGGAAATGAT ACCTATAGTT GCTGATTCTG CTACCAAAGC TTTAAGCGAC
TTGGAACAGG GAAAAGTTTT TGATCTTGGA ATTATTGCTA TGGATATTTC AGATATGGAT
GGGTTGACAT TAGCTAGAAA GATTCGCAAG TTGGAAGCTG AACAAAACTC AAAACAAAAT
AAGAATGATA AGTCATTTTT ACCATTACTA ATGTTGAATT ATATTGATAC AGTAGATATT
TCCCGAGAAC TTCAGGAAGC AAAAGTTAGT CTAGCTGGAT TTTTGAATAT ACCTATCAAA
CAGTCTCAGT TTTATAATGT TTTATTGGAA GTATTTGGAA CTAGAAAGGA AGAAGAGGTA
AACGACAAAG TTCCTAGTTT AGATATGGAA GATTTTCAAG ATTTAAGTGA AAAAAATAGG
GATTATACTA ATATTCGTAT ATTGTTAGCA GAGAATAATG TAGTGAATCA AAAAGTTGTA
ATACACTTAC TAGAAAAAAT TGGTTACCTT GCAGATGTAG CTGCTAACAA AGTAGAATTT
TTGGATGCTT TGAAGCGGAT ATCCTATGAT GTGGTATTAA TGGATGTGCA GATGAATAAT
GGAGATGGGA TAGGAATAAC TAATCAAATA TGTCAAAGAT ACTCTGAAGA AAAACGCCCT
TGGATAATTG CTATGACAGC TAATGCAAGG TCGGGCGATC GCGAGAAGTA TCTAAATGCT
GGTATGGATG ATTATATGAC TAAACCAGTT GATCAGGAAA AATTAGTAGA AGTTTTAAAT
AAATTCAAGA GAATACGAAA CCAAAAATTA GGCTCCAAAA CGGATTTAGA AAATGCAGTT
AGGAGTCATT CTTCTGTTAT CAGGTCAACA TTAGTTAAAA CTAACTCTTC TAGGCAACCA
GTTATTCAGA AGCCGAGTTT TACTAACTTT CAGGTAGAGT CAACTTCTCA GTCAGATGAA
ATAATATCAC TCAAAAGTAC GTTGCCTATT GTTATACCAA GCAATATAGA AGATGTACCA
GAAACTAAAG AAATTACAAT GCCAGGTTTA GATTTATTAA ACGATCAACA ACTGGCTGTC
GATCCTAAAA TTATAGAAAA ATTTTGCAAT CTTTATTATG ATGAACCAGA TACCCCAATT
ATTTTGATAC AAGATTATCT TACTGATGGG AATAAAAATA TAAATATGAT TAGGAATTAT
ATCAACAAGG GTAATTTTAA TGCATTAAAG ACAGCTTCTC AGAAATTCAA GACTAGCAGT
GCTTTATTGG GGGCAATTAA TTTTTCTAAA CTATGTGAAG AGTTAGAGAA GATGGCTCTT
GCTGTGATTG AGTCTAGAGA AGATTTTGAT TTAGAAAAAG CTACGAAAAT TTTCTTACAA
AGCAAAAATG AATGGGAAAG AGTTCAAAAA GAGTTAAGTA CAAAAATGAA TTGCTAG
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| Protein sequence | MLIPSISQVI NYHPLTATAE TAVEDIIISM SSTGSSCVLI TEKPSFSTSI KIVTPGDRSP
GSPKGNHHSN SPDAKLQYLG PVIGIFTEGD LVQLASIGAP LSGFPIAQIM IRSIVTAQLS
EIPDIFALFA LFEKHKINHL PIVDNLERLI GLITGHSFLL NLNNIKKKGE KSILSRKKIK
SQQKLSANQN NTVNKGLKSE NNLLKNPNNQ LLPQEITFDS SLELPGNFIP INHLEKTHES
QVIQGSFSLS IKQITQLMST HNVSYVLIIE ATEKKYQNET DIYLNQESSN SQKSIKIIGT
ISSRDIVQLQ ALKIDFNKVK AGIVCNKSPI VIGSDVTLEL AVDLINKKYC LLPLIVQNYI
GKIDYFISPT KVIRQILLNK SLYQSLIRFY SYVEKTYLKL HQANKKLKQY TIEQNNLEKS
QLAAPETTGI TLKLDQDGIW DWNIETGEIF YSTLGEKMLG YTEHEISHKI SFDEWLSRIH
PEDRDKVNTA IQEHLTKKNT IYKIKYRIQG KDNNFIWIFD SGQTLWKSGK PVRMVGIFVD
ITKEKEAEIK QSFLVEKHIQ IINNLSEIVW ETDIHGNLIF LNQAWEKITG FKPKNSLGKN
FLDYIHPEDI NKLNFLTKNH PENTELAIIH NKLVADSYQL QLLTKTGGYC PVKMKSTLVF
DRENKVTGIV STLSNISEDI ATQQQLQASQ KAIKELYEVT TNADISFESK IVALLEMGCH
RFGMDIGLLG QVLGELYKVI AAHLPENFLF GIAEGDIFTL EQTFDQEALQ YDEPFVIESA
KNSQWRHHPA HTVRHVESYI GTKILASGIV YGTLSFSSRL TKNKWSSIDI EVLKLMANYI
GGELLREDER KALENKYQHF LLLKQITQEI CSKLDTKEIF QTTVTQIGRA FKVSRCLIHS
YVTEPDLHLP CMAEYLETNH ESILGLDLII TSNYYTEKLL GEDRAIASPD VFSDPLLNSD
VPMYQKLKVR SILAIRTSYQ GKPNGIIHLH QCDYIRQWKQ DEISLLEEVA FQVGLTLAKA
QILESEVTHK EELEAENQAL EKAREVAEVR NRAQGELLAM MSHKSQTNMN DVMMMTSLLL
SMKLNPKQRD FVKTILARGD VVINMINNIL DFTKIKSGEV ELELSPLDIR GCVEDLLKSL
DIIAKNKKLE LAYLIDKNVP RIILTDDKKL VNILFNLLKN SINFTKTGEI VVYISAIKKS
EKSQEYSQLE AISYEEISDF KGAGKITDNY EIQFAVKDTG AGIPLDQIDH LFKDFSQVSP
ATNREYDGLG LGLVISQRLS QMMGGQMWVV SQPLEIKNLS EEKKQISLLK IEDSRDINFP
KNPINVYNSS SPESKVNIAG NPPHYFVKPE LSGRGSIFYF TIQAKAIAMY SPEIVDGLLR
GKKILVVESN IINQEEIKQQ VKQWEMIPIV ADSATKALSD LEQGKVFDLG IIAMDISDMD
GLTLARKIRK LEAEQNSKQN KNDKSFLPLL MLNYIDTVDI SRELQEAKVS LAGFLNIPIK
QSQFYNVLLE VFGTRKEEEV NDKVPSLDME DFQDLSEKNR DYTNIRILLA ENNVVNQKVV
IHLLEKIGYL ADVAANKVEF LDALKRISYD VVLMDVQMNN GDGIGITNQI CQRYSEEKRP
WIIAMTANAR SGDREKYLNA GMDDYMTKPV DQEKLVEVLN KFKRIRNQKL GSKTDLENAV
RSHSSVIRST LVKTNSSRQP VIQKPSFTNF QVESTSQSDE IISLKSTLPI VIPSNIEDVP
ETKEITMPGL DLLNDQQLAV DPKIIEKFCN LYYDEPDTPI ILIQDYLTDG NKNINMIRNY
INKGNFNALK TASQKFKTSS ALLGAINFSK LCEELEKMAL AVIESREDFD LEKATKIFLQ
SKNEWERVQK ELSTKMNC
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