| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4316 |
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| Symbol | |
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| ID | 4245968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 6656389 |
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| End bp | 6657726 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638109206 |
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| Product | OpcA protein |
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| Protein accession | YP_723784 |
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| Protein GI | 113477723 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3429] Glucose-6-P dehydrogenase subunit |
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| TIGRFAM ID | [TIGR00534] opcA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.362638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.129489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTACAA CAACTGTAGC CTTACAACGA CCAAAAGATA TTTCCCTAGG AGAAATAGAA
GAAGAACTAA GTAAAATCTG GCTTAGTCAA AATCAAGGTA AAGTAACTTC CATTGCTACT
AAAGCTGCCA CCTTTAGTAT AGTAGTTTAT GAACCGGAAG AATTCCAACA ATTGCTAGGA
GGACTAGGAT TCTATAATGG TCCAATTGAT GGTATTCATG GGCCAGAAAC TAGAAATGCA
GTTAAAGAGG CACAAAAAGC CTATAAACTG ACAATTACAG GTAGAGTAGA TCCTAAAACC
CTAGCTAAAT TGCGGGAAGA ATTTGCCAAA AAACCAGAAG ACTCTCAAAA AATCACAAAT
GTGAATCTGA GGGGGTTTAG TATGTCAAAT GTGATCGCTG CTCAAAACCC TAGTCGTGTT
ATGACCCTAT GTCCAACTAT GGGGGAAGAA GATACAGGGG TTACAGCTCA AGTATCTGCC
TATTGCCCAA TTCAGAAGCA AAGTAACTCA AATCTAGTTT GTAGTGAGTA TGTCACCCTC
CGAGGAACAA AGTCAGCAAT GCAAAGGGTA GATGAAACAA TAAAATCATT AATGGTTCCC
GAACTACCAA AGTTTGTCTG GTGGAAAGCG ACCCCTAACA CAGAGCAAAA ATTATTTCGT
ACTTTGTGTG AGACGAGCAA TTGCATGATT ATGGACTCTT GTTACTTTTC CGATCCCGAG
TCAGAATTTT TAAAGATGCA GGAGTTGATA GAAAAGAAAA CTTATATTGC TGATCTCAAT
TGGCATCGTC TATCAGCTTG GCAAGAATTA ATTGCTGCTA GTTTTGATCC TCCCCAACGC
CGGGCAGCTT TATGGGAAGT TGATACTGTG ACAATTGACT ATGAAAAAGG AAATGCTGCT
CAAGCACTAA TGTTTTTAGG TTGGTTTGCT AGTCGTCTGA ATTGGGAACC AGTATTTTAT
AAAGAATTAG GTGGTGATTA TGATATTACC CATATCAAGT TTAGTGGGAA TAAGGATCAA
GAAATCTTGG CTGAGTTAGG AGCTATTCCT ACTGCTGACT TTGGTGAGGT TCCAGGAGAT
TTGGTGGGTT TACGTTTAGG TTCGAGTAAT CAAGATGCTG ATGTTAATTG TTGCACAATT
TTGTGTTCTG AAACTACTGG TTGTATGCGG TTAGAGTCTG GGGGTAAGGC GCAGTCTTGT
TTGACTGAGC AGGTGACAGC ATTAAGCGAT CAGAAAGCAG AAGCTTTGAT GGCACAACAG
TTACAACGTT GGGGACAGGA TGTTTTGTAT GAGGAAAGTT TAGCATTGAC AGTACAAATG
CTGAAGTTAA GAACATAG
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| Protein sequence | MITTTVALQR PKDISLGEIE EELSKIWLSQ NQGKVTSIAT KAATFSIVVY EPEEFQQLLG
GLGFYNGPID GIHGPETRNA VKEAQKAYKL TITGRVDPKT LAKLREEFAK KPEDSQKITN
VNLRGFSMSN VIAAQNPSRV MTLCPTMGEE DTGVTAQVSA YCPIQKQSNS NLVCSEYVTL
RGTKSAMQRV DETIKSLMVP ELPKFVWWKA TPNTEQKLFR TLCETSNCMI MDSCYFSDPE
SEFLKMQELI EKKTYIADLN WHRLSAWQEL IAASFDPPQR RAALWEVDTV TIDYEKGNAA
QALMFLGWFA SRLNWEPVFY KELGGDYDIT HIKFSGNKDQ EILAELGAIP TADFGEVPGD
LVGLRLGSSN QDADVNCCTI LCSETTGCMR LESGGKAQSC LTEQVTALSD QKAEALMAQQ
LQRWGQDVLY EESLALTVQM LKLRT
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