| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4298 |
|---|
| Symbol | |
|---|
| ID | 4245950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6619684 |
|---|
| End bp | 6621075 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638109188 |
|---|
| Product | putative sensor protein |
|---|
| Protein accession | YP_723766 |
|---|
| Protein GI | 113477705 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4250] Predicted sensor protein/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.889875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.204106 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCCA AAGCAACTTT AAATCAACTT AAAAAAAGAA GTCCAGAAGG AAAATTGCCC
GGCAGTTATG GAGTTTATTT TAAAAATACA CTAGTAGCTC TATGTCATGC TTTAGAAGAC
CACATATTAC AAGTCAGCAG TCAACATCCA GAAGCTAAAC CATTAGTTTT AGCAACATTT
CAACAAGGAA AATGGTATCT GCAAGAAGCA GACCGCTATC AAGAATTAGC TCAATGTAGC
CGTCACATTA TGATAGCAGC AGTAGCAGAT AGTGGTTTAT CCAAACATCC TACAAGTAAG
TTAGATAATG TATCTTTAAT TAATCTAGAA ACAACAGACA GTATAGTTAA TGAATGGAAT
CTAATTATTC TAGCTCCAAG TTACCGAGCT ATGGTACTTT GCCATGAACT CTCTGAAGAT
GAATATTTAC CCAACTGTAA ACCAACTGTA GATATAGAAA GAAAATTCTA TGGTTTATGG
ACTTTTGATG AAACTTTAGT AGCTAAAGCA GCCGAAATTC TTGTAGAAAG ATGTCGCCCT
TACAACCCAG AACTCGCAGA TACAATTCAA AAACAACATC AGGAAATTAT TGAGACTAAA
GGTATAGCAC CCACAGATAT GAGCGGTGTA GTTTCTAGAA TAGTTTCTTA CCTGCAAAAA
ACTCAGGAAC AAATGATTGC TATCAATAGA CAAACAAGGG AACTTTGGGA ACTAGAAGAT
CAAGCATTAC GCGTGACTCA CAACCTTAAT ACTAACAAGT TGCAAGCATT TATACGAATG
GCACAGAAAG TAGACGAGCA AGATCAAACA AACCCCCTTG CATCTTTGCA AGTAGCAGCT
TTATGTGAAA CTTTAGGGAA CTTGTTAGAT TTACCAACCC CAAAATTGCG ACGTTTACGG
TTGGCAGGAT TATTGTTTCG AGTTGGCTTA GTTTCAGCTC CAAAAGAAGT ATTTTCTAAA
ACACCTGATG AGTTAGATCC TAAAAGTTTA AATTTTTGGC AGAAACAGAA TCTGTTTGGA
TCTCAGTTAT TAGGAGCAAT GCCAGAGTTA GTACCTATCA CTAAAATTAT TGCTCATTAC
TTAGAATACT GGGATGGTAG TGGTAAGCCA GATGGTCTCA AAGAAGAAGA AATACCGATA
GAATCTCGTA TTCTGGGTTT AGTTTCTTAC TTCCAAGAGC TGACAATACC AAGGGGTAAA
CGCCCTGCTC TTAGTTTGGG AGAATCTCTA GAAAAGTGTA GCGCTCGCAA AGGCACTTAT
TTTGACCCTA CTTTAGTAGA AACCCTCAAC AATGTAGTTC GATTAACAGA AATGGGTCTA
ATGGAGTTAC CTAAAAGGCC AAGTCAATTA CCCAACGTTT GGTTAGAAGA TGTTGCTAGG
CTAATCGAAT AA
|
|---|
| Protein sequence | MDSKATLNQL KKRSPEGKLP GSYGVYFKNT LVALCHALED HILQVSSQHP EAKPLVLATF
QQGKWYLQEA DRYQELAQCS RHIMIAAVAD SGLSKHPTSK LDNVSLINLE TTDSIVNEWN
LIILAPSYRA MVLCHELSED EYLPNCKPTV DIERKFYGLW TFDETLVAKA AEILVERCRP
YNPELADTIQ KQHQEIIETK GIAPTDMSGV VSRIVSYLQK TQEQMIAINR QTRELWELED
QALRVTHNLN TNKLQAFIRM AQKVDEQDQT NPLASLQVAA LCETLGNLLD LPTPKLRRLR
LAGLLFRVGL VSAPKEVFSK TPDELDPKSL NFWQKQNLFG SQLLGAMPEL VPITKIIAHY
LEYWDGSGKP DGLKEEEIPI ESRILGLVSY FQELTIPRGK RPALSLGESL EKCSARKGTY
FDPTLVETLN NVVRLTEMGL MELPKRPSQL PNVWLEDVAR LIE
|
|---|
| |