Gene Tery_4280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4280 
Symbol 
ID4245932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6601516 
End bp6602184 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content35% 
IMG OID638109172 
Producthypothetical protein 
Protein accessionYP_723750 
Protein GI113477689 
COG category[C] Energy production and conversion 
COG ID[COG3411] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.135109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0638325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAT TCAAGCGTCA GAAAAAATTC AGCCTGGAAG GAAAAGTCCA AGAAGTTACT 
ATCAAGGATG GCTACAAGCT GAAATATGTT CATGTAGAGA CACTGGCCGG AAATAATTAT
GTTGTCAAAG TAGCCAAGCA TTTACGGCGA AACTTTTCAT CAGTATTAAC ACCAGGTTTA
GAGGTGAAAA TCAAAGGTGA AATGGCATTA TGTAAAAAAA CTGGTGAAGA AGAGCTTAAG
GCTTTTAAGA TTACACCAGA TTTTACTGCA AAAGCTACAG AAATATGGCC AAGTCAGCCT
GTAGCATTAC TTGAAAAGTC ATCAAGTCAA CTAACAGAAA TGAAGTTGCC CGATACTGAG
GAGATATCTA GTAAATCTCA AAAAACGACT GAAGGTAATG CTAAATGTGT AGGTAAAAAA
GCTGAAATTT TGGTATGTCA AAAATCCGAT TGTGAAAAAC GAGGTGCAAG TAAAATTTGT
AAAGCATTGT CTAAAGCATT GAGCGAGCAT GATTTACAAG ACCAGGTAAA AATCAAGAAG
ACAGGATGTC TGAAAAAATG TAAAGCTGGA CCCAATATAA TAGTTATGCC CCAGAAAGCT
AAATATAGTC GTATTCGTTC AGCAGAAATT CCTCAAGTTA TTCAAAAACA TTTCGTATTA
AAAGCATAA
 
Protein sequence
MSKFKRQKKF SLEGKVQEVT IKDGYKLKYV HVETLAGNNY VVKVAKHLRR NFSSVLTPGL 
EVKIKGEMAL CKKTGEEELK AFKITPDFTA KATEIWPSQP VALLEKSSSQ LTEMKLPDTE
EISSKSQKTT EGNAKCVGKK AEILVCQKSD CEKRGASKIC KALSKALSEH DLQDQVKIKK
TGCLKKCKAG PNIIVMPQKA KYSRIRSAEI PQVIQKHFVL KA