| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4273 |
|---|
| Symbol | |
|---|
| ID | 4245925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6590705 |
|---|
| End bp | 6591190 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638109165 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_723743 |
|---|
| Protein GI | 113477682 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2405] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.243537 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGAAT TTCCGGCAGT AAATACTTCA CCTTTGATTT TTTTGACTCA AGCAAATTTG
CTCAACTTCC TGCAAATGCT GAGTCCAAAA ATTATTGTTC CTCAAGCAGT AGCTACAGAA
ATTCAAGCCT ACGGAAACAC AGATGTAACT GCCCAAATGT TAGCTCAAAC AGATTGGTTA
GTTGTGACTC AAACTCCTGC TATTCCTGCT GTGATTCAAA GTTGGGATTT AGGAGCAGGA
GAATCAGAGG TTTTGAGTTG GGGGTATCAT CACCCAAATA CAGAAGTGAT TATTGATGAT
TTAGCTGCTC GTCGTTGTGC CCAAGCGTTA GGAATTCCGG TGAGAGGTAC TTTGGGTTTA
GTTTTAACTG CCAAACAACG TGGAGTAATT TCAGAAGCAC GTCCTGTTTT AGAACAGTTA
AGGTTGTCTG GAATGTATCT ATCAGAGAGA TTAATGAATC AAGTCTTGAT GTCAGTGGGA
GAGTAA
|
|---|
| Protein sequence | MAEFPAVNTS PLIFLTQANL LNFLQMLSPK IIVPQAVATE IQAYGNTDVT AQMLAQTDWL
VVTQTPAIPA VIQSWDLGAG ESEVLSWGYH HPNTEVIIDD LAARRCAQAL GIPVRGTLGL
VLTAKQRGVI SEARPVLEQL RLSGMYLSER LMNQVLMSVG E
|
|---|
| |