| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4233 |
|---|
| Symbol | |
|---|
| ID | 4245885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 6536914 |
|---|
| End bp | 6539223 |
|---|
| Gene Length | 2310 bp |
|---|
| Protein Length | 769 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 638109129 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_723707 |
|---|
| Protein GI | 113477646 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATATC ATAGCAGAGG TGGAGTAAGA GATGGTGCAG GTAGACCTTC TAAAGCTCCT
ACTAAAACAA TAAGAATTGA AGAAAATTTG GCGGATAAAA TTAAGAAATT AACGACCAAA
TTAGAATCTA ATTACATTTT AAGTAAGTGG GAGAGTCTAG AAAACTTTCT GCTACATAAT
CAAACTTTCC CACAGCAAGA TACAAATAAT AAACTACCTC CAAAATTATC AAAAGCTTTA
GAGGATAAAG CACTAGTAGA AATGCTAGAA TTAATTTTTA GTAAATTTTC TCCTGGTGAT
TTTATTGACT ATTGGTCAGA TATTGACCTT ACTGAAATAG AACCTATATC AGAAACTCAG
TTGGCAGTGT CAAACGTATT ACATGAAGCT ACAACAGAGA AAGGATATAC AGTAACCACT
CCAGAAGTAA ACAAAGTTTT GGATGTGACA CTAGAAAAGT CAGAAGTTCT TTCAGTAGTT
GAGTTTTCAG ACTATAAGAA TAGTAATGGA AATTTCTTAA CTCAAGAGCA ATTTAATATT
TTAGAAGCTG TGCGCGATAG AATATCAGTT CCACTCCGCG ATCGCATCCC TCAAGCTGAG
AAAAAAGGAT TATTAATTGA AGCATTAGCT GGTACTGGAA AAAGTACAAT GTTAGCTGAG
ATAGCTAAAG TTTTGAAGTC TGAAAATCTA TCCCCACTAG AATGCAGATT TGTTGTATTT
GGTAGGAAAA ATAAACAAGA TTTAACTGAT AAATTATCAG AGATAAAATG GGATAAATCA
GTACAAACTC TTAACAGTTT AGGCTATGAA ATTTTGAGAG ATGCACTAGG TAAAGGCCAT
AAACAATTTA GACTTAATAA TGGAAAGTAT GAGAAAATAG CTCAGGATAA AGGTTATTTA
GATTCTTATA ATAAATGGGG TGAAAAAATA CCAGGTAAAT TACCAGTCGA AAATCGTAAG
GGAGACTTAG CTATTATATC AAAGGCTGGT TTTGTAGATT TATTAGATAA AATGAGATTG
CATTGTTATT TTCTAGATGA GATTAGTAGC GATGATGTAT GGGAGATAGC AAATAAATAT
GGAATTGAAA TATATAAAAA TAGTCTAGGT GAAATAACTG AGGCTGTTTG TGATATTTTA
GAGGCTGGTT TAAATGATGG AATTAATAAG TTAAATATAG ATTTTTTAGA CCAAATTTGG
TTATTGTGGC ACGACCAAAA TGTATATAAA AATGTGTTTA ATAAATGGTC AAATAAACTG
AAAGTTATTT CTATAGATGA GTGTCAAGAT ACAGATTTGT TGCAGATAGA ATTTATTAAA
TTGCTGCACA AATCATCTAA TGATTTTATA ATTGCAGTAG GCGATCGCTT CCAAGCAATT
TATAGTTTCA GAGGCTGTTT AACAGATGGA ATTGATGTAA TTGCCAAAAA ATTTAACTGT
GATAAAATGC CATTAACTAC TAACTGGAGA TGTGGCAAAA AACATCTAAA ATTAGTTAGA
GATATTTACC CACATATAGA TATTAAACCA GCTCCTACAG CTCCAGATGG TGAAATTAGG
ATTATCAAAG AGAATCACTT TTTAGATATA TTTGATAGTG CTGATAGGAG TTTATCATTT
TTTGGTGTTT GTAGGAAAAA TGCACCCTTA CTTATTTTTG CCATTAGACT TTTAACTGCT
GGATATCCTG CCAGAATTAA AGATAGAAAT TTAGGGGCAA AATTACTAAA TAAAGTCAAG
GAAGTTGTGA GAGGTAATTA TGATGTTAAT ACTTTTTTGA GTCAGGTTGA TAATTGGTTT
AATTTTCAAG CTAATTCTAT TAATAGATTG CCAGAAAAAG TTCAGAACCA AAGGTTAACT
GAACTGAGAG ATTATAGAGA TTGTTTGGTG GCTTTTTTTG CTAAATTTCA ACCTAAAAGT
TTGAATGATT GGAAAACAGA AATAGATAAG ATTTTTGATG AATCAACTAC TACTAAAAAA
ATTATAGATT TATATACTAT TCATAGTGGT AAAGGTGGAG AAGGACATTA TACATTTATT
ATTTATCCTG AGAATATGCC TATAGAATTT GAGAAGCAAA GCACAGAAGA AAGGCAGCAG
GAACAACATA ACATTTACGT TGCTTTAACC CGCTGCCTGA CTCGTGCTAA AGGTGGTATT
TTGTGGTTGG TGTTGGAGGG TAAAAAGGAT CCAATAACTT ACCCTAAATG GTTACCAGAT
GAATACCGTC AGCTTTGGAA AGATGATAAA GATGAGGCCT TTGAGACTGA TTTAGAAAAT
TTAGGAGATG AGTATGATAT TGAGTTTTGA
|
|---|
| Protein sequence | MAYHSRGGVR DGAGRPSKAP TKTIRIEENL ADKIKKLTTK LESNYILSKW ESLENFLLHN
QTFPQQDTNN KLPPKLSKAL EDKALVEMLE LIFSKFSPGD FIDYWSDIDL TEIEPISETQ
LAVSNVLHEA TTEKGYTVTT PEVNKVLDVT LEKSEVLSVV EFSDYKNSNG NFLTQEQFNI
LEAVRDRISV PLRDRIPQAE KKGLLIEALA GTGKSTMLAE IAKVLKSENL SPLECRFVVF
GRKNKQDLTD KLSEIKWDKS VQTLNSLGYE ILRDALGKGH KQFRLNNGKY EKIAQDKGYL
DSYNKWGEKI PGKLPVENRK GDLAIISKAG FVDLLDKMRL HCYFLDEISS DDVWEIANKY
GIEIYKNSLG EITEAVCDIL EAGLNDGINK LNIDFLDQIW LLWHDQNVYK NVFNKWSNKL
KVISIDECQD TDLLQIEFIK LLHKSSNDFI IAVGDRFQAI YSFRGCLTDG IDVIAKKFNC
DKMPLTTNWR CGKKHLKLVR DIYPHIDIKP APTAPDGEIR IIKENHFLDI FDSADRSLSF
FGVCRKNAPL LIFAIRLLTA GYPARIKDRN LGAKLLNKVK EVVRGNYDVN TFLSQVDNWF
NFQANSINRL PEKVQNQRLT ELRDYRDCLV AFFAKFQPKS LNDWKTEIDK IFDESTTTKK
IIDLYTIHSG KGGEGHYTFI IYPENMPIEF EKQSTEERQQ EQHNIYVALT RCLTRAKGGI
LWLVLEGKKD PITYPKWLPD EYRQLWKDDK DEAFETDLEN LGDEYDIEF
|
|---|
| |