Gene Tery_4220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4220 
Symbol 
ID4245872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6511382 
End bp6511732 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content40% 
IMG OID638109116 
ProductHxlR family transcriptional regulator 
Protein accessionYP_723694 
Protein GI113477633 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATG TACCGTGTTT AAGTAACAGT TGTCCGATTC AGTTCGCATT AGGAATATTA 
GGGTGCAAGT GGTCAGTGTT GATTTTGCGA GAGTTGTTAA GTGGCGATCG CCGAACTCAT
GAATTATTAG AAGCTTTACA AGGAATTAGC TCAAAAACTC TGATGTTAAG ACTGAGAGAG
TTTGAAAAGC ATGGTTTGTT AGCAAGGCGG GCATATCCAG AAGTGCCACC CCATGTTGAA
TATTCTCTGA CGGAGAAAGG TCTACAAATA CAACCAGTAA TAATAGCTCT CAAACAGTTA
GGAGAACAAT GGTTGGAAGA GAAAAATTGT GGTTGTTCAA TGGATAGGTG A
 
Protein sequence
MTDVPCLSNS CPIQFALGIL GCKWSVLILR ELLSGDRRTH ELLEALQGIS SKTLMLRLRE 
FEKHGLLARR AYPEVPPHVE YSLTEKGLQI QPVIIALKQL GEQWLEEKNC GCSMDR