| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4190 |
|---|
| Symbol | |
|---|
| ID | 4245842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 6458807 |
|---|
| End bp | 6460912 |
|---|
| Gene Length | 2106 bp |
|---|
| Protein Length | 701 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638109089 |
|---|
| Product | exonuclease RecJ |
|---|
| Protein accession | YP_723667 |
|---|
| Protein GI | 113477606 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
|---|
| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACC AACCTCATTC CCAAATACAA CAACAAAAAT TACCTAACCA AAGGTGGTTG
ATACATCCAG AAAAACCAGA AATTACTAAC AATTTAGCTA AAACTCTAGA AATATCACCC
TTAATAGCTC AGAGTCTTAT TAACCGCGAT ATTTCTACTA TCGAAGAAGC ACAAGTATTT
TTAGACCCTG GGTCAATAAA ACTACCTTCT CCAATACAAG AATTTCCCGA CTTAGAGATC
GCTCTTAACT TATTACAAAC CACAATTTCC CAAAAGAAAA AAATTGCTAT TTGTGGTGAC
TATGATGCAG ATGGCATGAC TAGCACTGCT TTATTATTGC GGAGTTTTAA ACATTTGGGA
GCAAAAGTTG ACTACGCTAT TCCCAGTAGA ATGCAGGAAG GTTATGGTAT CAATGAACGC
ATTATTGAAG AATTTCATCA AGAAGGAGTC AGTCTCATCC TGACTGTAGA CAATGGTATC
TCTGCATATA AACCTATCGC TAGAGCTCGG GAACTTGGTT TAAATGTTAT TATTACTGAC
CACCATGACA TTCCACCTGA GCTACCACCT GCTAACGCTA TTCTTAACCC CAAACTCATT
TCCGAAACTT CTCCTTATCA AGGTGTGGCA GGTGTGGGAG TTGCTTATAT TTTGGCACTA
TCTCTGGCAA AACGTCTCGA CAAACTTTCA GGTTTAACTG ACCCACTTTT AGAATTATTC
ACTTTAGGTA CTATTGCTGA CTTGGCACCT TTAACTGGAG TTAACCGTCG CTGGGTGAAA
CAAGGGTTGC AACTTTTACC CCATTCCCAG TTAGCGGGGG TACGAGCATT AATTCAAGTA
TCTGATGTTA AAGCACAAGC GCAGGGAAAT TTGAAAGAAA CTAAGAATCA AAAATCTCTG
AAACCAGATG ATATTGGCTT TCGTCTTGGT CCCCGTATTA ATGCAGTGGG ACGCATTGCT
GATCCACAAA TTGTTATTGA ACTTTTAACG ACGGATGATA AAGAAGTGGC GGCAACAAGG
GCGAAACAGT GTCAAGAAAT TAATCAAACA CGGCAGGAGT TATGTGCAGA AATTGAACAA
CAGGCGATCA CTTGGTGTGA GGAGAGTCAG ATAAATTTTG AGAAGGAAAG GGTGTTGGTC
GTTGTACAAC CAGGATGGCA TCATGGGGTT ATTGGTATTG TGGCTTCCCG GTTGGTGGAA
CGTTATGGGG TGCCTGTTTT TATTGGCAGT TATGAGGAGG AGCAAGGGCC AGATGCAAAT
TTGGCAAGTT CTCCAGGGGT TATGTTTGCT TCATCTGAAA CAACTTATAC AATTCGGGGT
TCTGCTCGCG GTATTCCTGA GTTTCATGTT TTTGAAGGGT TACAATTTTG TGATGACCTA
TTAGGAAAAT ATGGTGGTCA TAAAGCAGCG GGGGGTTTTT CTTTGCCTGG AAAAAATTTA
GATGAGTTTC GCTCCCGTTT GAGTGAGTTT GCTCATCAAT GTTTAAAAAT TCATCACTTA
AAACCTTTAA TTACTATTGA TGCTGAAGCC GAATTTAAGG AGCTCAATTT TGACCTTTAT
CATCAAATAG ATTTACTTCA TCCCTGCGGA ATTGAAAATA GATCTCCGAT TTTTTGGACT
TCTAATGTCC GAGTTGCAGA ACAGAAAATT GTTGGTGCAG GGCATATTAA ATTAACTTTA
ATTAAGTCAG AAATAATCAA GGCGATCGCT TGGCGTTGGG GAGATTATTT TCGTTTACCA
AGCTTAGTTG ATATTGCTTA CAAATTGCGT GAAAATACTT TTAATGGTCA AACTTCTATT
GAATTAGAGT TAGTTGGTGT GCGTTTACCT CAGAAAGTTT ATGCTAATCA AAAATCGTCA
CATTTACCCC CAATTAAAAA GTTTTATTAT CGCAATTGCT CTTATACTTG TAGTCTTTAT
AAAGTTGGAA ATTTACAGGA ATTAAGAATC CAAAATTCCC GTGGTGACGT CTTAGCTATT
CAAAAAGGGA AAAGAATAGG TTTGTTAGGA AAAAGCCGCA ATAATGCGCA ACAAGTCGAT
GTTTCTAAAC CTCACTTTTT TCATTTAATT AAGGCAGCTA TAAATGCTTT AAACCTCAAT
TTATAA
|
|---|
| Protein sequence | MQNQPHSQIQ QQKLPNQRWL IHPEKPEITN NLAKTLEISP LIAQSLINRD ISTIEEAQVF
LDPGSIKLPS PIQEFPDLEI ALNLLQTTIS QKKKIAICGD YDADGMTSTA LLLRSFKHLG
AKVDYAIPSR MQEGYGINER IIEEFHQEGV SLILTVDNGI SAYKPIARAR ELGLNVIITD
HHDIPPELPP ANAILNPKLI SETSPYQGVA GVGVAYILAL SLAKRLDKLS GLTDPLLELF
TLGTIADLAP LTGVNRRWVK QGLQLLPHSQ LAGVRALIQV SDVKAQAQGN LKETKNQKSL
KPDDIGFRLG PRINAVGRIA DPQIVIELLT TDDKEVAATR AKQCQEINQT RQELCAEIEQ
QAITWCEESQ INFEKERVLV VVQPGWHHGV IGIVASRLVE RYGVPVFIGS YEEEQGPDAN
LASSPGVMFA SSETTYTIRG SARGIPEFHV FEGLQFCDDL LGKYGGHKAA GGFSLPGKNL
DEFRSRLSEF AHQCLKIHHL KPLITIDAEA EFKELNFDLY HQIDLLHPCG IENRSPIFWT
SNVRVAEQKI VGAGHIKLTL IKSEIIKAIA WRWGDYFRLP SLVDIAYKLR ENTFNGQTSI
ELELVGVRLP QKVYANQKSS HLPPIKKFYY RNCSYTCSLY KVGNLQELRI QNSRGDVLAI
QKGKRIGLLG KSRNNAQQVD VSKPHFFHLI KAAINALNLN L
|
|---|
| |