Gene Tery_4178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4178 
Symbol 
ID4245830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6440262 
End bp6440552 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content34% 
IMG OID638109079 
Productphage related lysozyme 
Protein accessionYP_723657 
Protein GI113477596 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.579424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.832729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCT CACAAAATTG CCTAGATTTA ATCAAAAAAT GGGAAGGATT TTCTCTGAAT 
GCTTATATAG ATCCAGTAGG AATAGCAACT ATTGGGTATG GAAGCATTCG TTATCCCAAT
GGAGAAAAAG TTCGTCTAGG AGATAGAATT TCAGAAAGAG ATGCAGAAGG ATATCTGGGT
TTTGAATGTA AGAAAATAGC ACTAGAAATT TCTAAATTAA TCAAAGTTCC TGTTAATCAA
AACCAATTTG ATGCTCTAGT ATCTTTTTCT TATGTGCGAC TCGTTGGCTA G
 
Protein sequence
MQVSQNCLDL IKKWEGFSLN AYIDPVGIAT IGYGSIRYPN GEKVRLGDRI SERDAEGYLG 
FECKKIALEI SKLIKVPVNQ NQFDALVSFS YVRLVG