Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4000 |
Symbol | |
ID | 4244567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 6189202 |
End bp | 6189579 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638108915 |
Product | response regulator receiver protein |
Protein accession | YP_723496 |
Protein GI | 113477435 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.508878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAAAA TTCTCTTAGT TGAAGACAAT GAGATGAACC GGGATATGTT GTCTAGACGT CTGATTCGTA AAAAATTTGA AGTAGTTATT GCTATTAATG GTGTGGAAGG TGTAGAAATG TCCATATCAG AAATACCAGA TATAATTCTC ATGGATATGA GTTTGCCTGA GCTCGACGGG TGGGAAGCAA CTAAGAAGAT TAAAGCTAAC CAACAAACTA AGGATATTCC GGTAATAGCA ATAACAGCTC ATGCTATGAC AGGAGACCGA GAAAAATGTT TACAAGCTGG ATGTGATGAT TATGATACAA AGCCAGTAGA ATTTCCCAGA TTATTAGAAA AGATCAACAA TCTTATAGAT AAAAAGCCAA GGCAATGA
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Protein sequence | MVKILLVEDN EMNRDMLSRR LIRKKFEVVI AINGVEGVEM SISEIPDIIL MDMSLPELDG WEATKKIKAN QQTKDIPVIA ITAHAMTGDR EKCLQAGCDD YDTKPVEFPR LLEKINNLID KKPRQ
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