Gene Tery_4000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4000 
Symbol 
ID4244567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6189202 
End bp6189579 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content36% 
IMG OID638108915 
Productresponse regulator receiver protein 
Protein accessionYP_723496 
Protein GI113477435 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.508878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAAAA TTCTCTTAGT TGAAGACAAT GAGATGAACC GGGATATGTT GTCTAGACGT 
CTGATTCGTA AAAAATTTGA AGTAGTTATT GCTATTAATG GTGTGGAAGG TGTAGAAATG
TCCATATCAG AAATACCAGA TATAATTCTC ATGGATATGA GTTTGCCTGA GCTCGACGGG
TGGGAAGCAA CTAAGAAGAT TAAAGCTAAC CAACAAACTA AGGATATTCC GGTAATAGCA
ATAACAGCTC ATGCTATGAC AGGAGACCGA GAAAAATGTT TACAAGCTGG ATGTGATGAT
TATGATACAA AGCCAGTAGA ATTTCCCAGA TTATTAGAAA AGATCAACAA TCTTATAGAT
AAAAAGCCAA GGCAATGA
 
Protein sequence
MVKILLVEDN EMNRDMLSRR LIRKKFEVVI AINGVEGVEM SISEIPDIIL MDMSLPELDG 
WEATKKIKAN QQTKDIPVIA ITAHAMTGDR EKCLQAGCDD YDTKPVEFPR LLEKINNLID
KKPRQ