| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3923 |
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| Symbol | |
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| ID | 4244006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 6059266 |
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| End bp | 6064635 |
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| Gene Length | 5370 bp |
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| Protein Length | 1789 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638108846 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_723428 |
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| Protein GI | 113477367 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.161753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATC CTGATCAAAA TGAAGTCGAA TTATTATCTG AGCTAATATT TGCTCTGGAA
ATGTCTCAAG GAGACTTTCG ACTATTTTTA GCCAGTTGTA ATTATCAAAC TCAGCGTCGA
CGGCTAATGG AAAAGCTCCA GACTTCTTTT TCTGGAGATT TAGCAATATT GGAGGTGGAT
GCGTCAGTTG AAAAACTTTA TACTACTATT GGCCAACATT TAGGAGAGCA ACAACCAGAT
GGGTTAATGG TTTGGGGTTT GGAGTCGAAC CGGAATATTG ATCAAATACT GGTATCAATG
GGGTTAGTGC GTGAAGAGTT TAAAAATAAT TATCAATTCC CAATACTTTT GTGGATAGAT
CAAGAGATTT CCCGGAAGTT TATTCGCTTA ATTCCTGATT TTGAAAGTTG GACAAGTCTG
ACTGTATTTG AAACTACTAC TCCAGAATTA AGAGATTTTA TTCAGCAGAC GAGTGAGAGT
GTTTATCAGA AAATATTAGA AAGTGGGGAA GGAATATTTT TAGATGATGC TGACCTGGGT
TTGGTAGAGT CTACTTATCA AAAATTGTTA GACGCACAGC AAGAATTGAC AAATAGAGGA
ATCAGCCTAG AGTCAGAATT GGAGGCAAGT CTGGAATTTG TTTTAGGTAG GATGGCAGAT
AATTCTACTA AAATAGCACT AGACCATTAT GAACGGAGTC TGGAACTTTG GCAACAACTT
AATAACCCGT TGCGAGTAGC TCACACTTAT TATTATCTGG GTTTATGGTG GCAGACTTAC
GGGTTTGAAC ATAAAGCAGA AAAAAATATG GCTTATGAGA AAGCTTGCTC TTATTTTCAA
CAGGTAATAG AAGGCTTTGA AACAGTTAAC CGTCGAGATT TAGTTGCTAA GTTTATCAAC
GCTTGGGGAA CAATTTTGCA GACTTTGAAA CGTTGGGATG AGTTGAATAC TGTGGGGAAT
AGGGCAATAG AATTACATAA AGCCTATTCT TATCCATTTC GAGAAGCTCG TGCTTACAAT
TTTCTAGCTG AGTTTGAATT GGCAAATAGC AATTATAAAA AAGCTAAAAA ATTTTCTGAA
ACTGCTATAA AAATTTTTAA CCAAACTCTA GATTATGCAT CTTCTCCTAC TTCAAATGAG
GATAAAAAAA CCTTAGATTG GGAACGCTAT TATCATCAAG GTAGATATTT ATTTTCTTTG
GCAAAATCTG AAAAAGGTAA TGGTAAAATC AAATCAGCTA TAGCCACTTT GGAACTGGCT
AAATCTACGA TAAACCCTAA GTATAATCAT GAATTTTGCA TCAAAATTAT CACAGAATTA
CGAGAAATAT ATTATCAACA AAAAGAATAT TTAAAGGCTT TTGAATTAAA GCAAGAAATA
CAAAAAATAA AACAACAATT TGGATTGATA GCTTTTATTG GTCCTAATTA TTTGAGAGAT
ATAAAAGAAA ATATCAATTT GGCTTTACCT CAGTCAAAAC AGAGAATTAA TCAACAAAAA
CTTACACAAG AAATAGCAGC ATCTGGACGA GAACTTGATG TGGAAAAATT GCTGGAAAGA
ATTAGTCGTA ATGACCATAA ATTAATAGTT ATTTATGGGG AATCAGGGGT AGGCAAGAGT
TCAATTTTAC AAGCTGGATT AGTTCCGATT TTAGAGGCAA AACCAATTAA TACTCGTGAT
GTAGTAGTAG TTTTACAACG AGTTTATGTT AATTGGATTT CCGAATTAGG AACAATTTTA
GCGGAAAAAT TACAAATAAT TCCCAATTTA AAAGTTAATT CAGAGAGTCT AAATTCCCCT
GAAGCAATTT TTGATCAGTT GAAAAATAAT GGTAATGATA AATTAAATCT ACTGACGGTA
ATCATTTTTG ATCAATTTGA GGAATTTTTC TTTGCCAAGA CCAATATGGA ACCAAAAGAT
AAACGACTAT TTGCTGAGTT TCTCCAAAAA TGTTTGGAAA TACCTTTTTT GAAAATAGTT
TTTTCATTGA GAGAAGATTA TATTCATTAT TTATTAGAGC TTAATCGTTT GGGTAATTTA
GATGCAATTA ATAATGATAT TTTAAGTAAA AATATACTTT ATTTTCTGGG TAATTTTTCA
CCGGATAACG CCAAATTAGT TATTGAAAGA TTAACAGAAA ATTCTCTATT TAAAATAGAG
AAAAATCTAA CAGAAAAGTT ACTGGAAGAC TTAGGAAAGC AGTCTGGAGA AATTCGTCCT
ATTGAGTTAC AAGTAGTAGG GGCACAACTC CAGGAAGATC AAATTACGAC TTTGGCAAAA
TATCAAGAAT TAGGAGATAA TCCTCAAGTA GAATTGGTAG AGAGCTCTTT AAAATCAGTA
GTGAAAGACT GTGGGGAAGA AAATGAAAAA TTGGCTTGGG TGGTGTTGTG GTTATTGACG
GATGAAAATA ATACTCGACC TCTGAAAACT AAGGCTGAGT TGGTGAAAGA AAGCCAATTA
AATCCGGAGA AGTTAGAGTT AGCATTAAAT ATTTTTGTGG GTTCGGGGTT AGTATTTTTG
CTGCCAAAAA AACCAGCAGC TCGTTATCAG TTAGTACATG ATTATTTGGT TTGGTTCATT
CGGCAAAGGA AAGGAGATAA AATAATAGAG GAACTGAAAC TATCTAGACA AGAAAAAAAG
AAAAATGCTA TTACTGAGGC AAATAAGTCT AGAGAGTTAT CTCTTTCAGG TCAGCGATGG
GATGGGTTGA TGACTGCTAT GAAAGCAAGG CAAAAACAAA TTGATAGTGA ATTTCCAGCA
ACTGATGAAG CTAGTGAGAT TACAAATGCC CTCCGCTTCG CAGTTTACAA ACGCAACAAA
GATGATGAAT TTAGAGAAAT TAATCGTATT CAGGGCCATG AGAATGAGGT CTATGGTATA
GCATTTAGTC CCGATGGAGA GACTATTGCT TCTGCAAGTG CTGACAATAC AGTGAAGTTG
TGGAACCGTG AGGGGAAATT ATTGCAGACT CTCACCGGCC ATGAGAAGGG GGTCTGGGAT
ATAGCATTTA GTCCCGATGG AGAGACTATT GCAACTGCCA GTCATGACAA AACAGTGAAG
TTGTGGAACC GTGAGGGGAA ATTATTGCAG ACTCTCACCG GCCATGAGAA GGGGGTCTGG
GATATAGCAT TTAGTCCCGA TGGAGAGACT ATTGCAACTG CTGGTGGTGA CAATACAGTG
AAGTTGTGGA ACCGTCAGGG GAATTTATTG CAGACTCTCA CCGGCCATGA GAATTGGGTC
TATGGTATAG CATTTAGTCC CGATGGAGAG ACTATTGCAA CTGCTGGTGG TGACAATACA
GTGAAGTTGT GGAACCGTCA GGGGAATTTA TTGCAGACTC TCACCGGCCA TGAGAAGGGG
GTCTATGGTA TAGCATTTAG TCCCGATGGA GAGACTATTG CTTCTGCAAG TGGTGACAAT
ACAGTGAAGT TGTGGAACCG TCAGGGGAAA TTATTGCAGA CTCTCACCGG CCATAAGGAT
TCGGTCTGGG GTATAACATT TAGTCCCGAT GGAGAGACTA TTGCAACTGC TGGTGGTGAC
AAAACAGTGA AGTTGTGGAA CCGTCAGGGG AAATTATTGC AGACTCTCAC CGGCCATGAG
AATGGGGTCT TTGGTATAGC ATTTAGTCCC GATGGAGAGA CTATTGCAAC TGCTGGTGGT
GACAAAACAG TGAAGTTGTG GAACCGTCAG GGGAAATTAT TGCAGACTCT CAGCGGCCAT
GAGAATTCGG TCTATGGTAT AGCATTTAGT CCCGATGGAG AGACTATTGC AACTGCTGGT
GGTGACAAAA CAGTGAAGTT GTGGAACGGT CAGGGGAAAT TATTGCAGAC TCTCACCGGC
CATGAGAATG GGGTCAATGG TATAGCATTT AGTCCCGATG GAGAGACTAT TGCAACTGCC
AGTCATGACA AAACAGTGAA GTTGTGGAAC CGTCAGGGGA AATTATTGCA GACTCTCACC
GGCCATAAGA ATTGGGTCTT GGGTATAGCA TTTAGTCCCG ATGGAGAGAC TATTGCTTCT
GCAAGTCGTG ACAAAACAGT GAAGTTGTGG AACCGTGAGG GGAATTTATT GCAGACTCTC
ACCAGCCATG AGAAGGAGGT CCGGGGTATA GCATTTAGTC CCGATGGAAA GACTATCGCT
TCTGCCAGTG GGACAACAGT GAAGTTGTGG AACCGTGAGG GGAAATTATT GCAGACTCTC
ACCGGCTATG AGAATTCGGT CTATGGTATA GCATTTAGTC CCGATGGAGA GACTATAGCA
ACTGCTAGTC GTGACAATAC AGTGAAGTTG TGGAACCGTC AGGGGAAATT ATTGCAGACT
CTCACCGGCC ATAAGAATTC GGTCTATGGT ATAGCATTTA GTCCCGATGG AGAGACTATT
GCTTCTGCCA GTCGTGACAA TACAGTGAAG TTGTGGAACC GTCAGGGGAA ATTATTGCAG
ACTCTCACCG GCCATGAGAG TTCGGTCGAA GCTGTAGCAT TTAGTCCCGA TGGAAAGACT
ATTGCAACTG CAAGTGCTGA CAAAACAGTG AAGTTGTGGA CAGGTTGGCG AATAGAAGAT
TTAACTAAAC GTGGTTGCCA GTGGTTAAAT GATTATTTGA TTAGCCATCC CCAGGAGTTA
GAGGAACTCG AAATTTGCCA GACTGACAAA CACAAGGAAT TAGCTGCTAG TAGTTGGGTA
ATAGAGGGAG AGAAGCTGGC AAGGGAAGGA AAGGTTAAAG AGGCAGTTGC CACATTTAAG
AAAGCACTGA AATGGAACCC AGACCTCAAG CTTAACCAAA ATTTCAAAGG TTTGGCAGCA
TCATTAGCTG AGGCAGAAAG ACTGATGGAG GAAGGAACTA CATTAGCAGA AGAAGAAAAA
ATAGAGGCGG CAGTGGAAAA ATACCAACGA GCAAAAGAAC TTGATAAAAT AGCATTTATC
CCTACTTGGC AAAATCTTGA CCCAGAAGCT AAAGCTAGAT ATCAGGCAGT GGATGCGTTG
TTGAATAAAG GGCTGACACT TGTCACGGTC GGTAAAGTTA AAGAAGCGAT CGCCTCCTAC
CAAAAAGCAG AAAAAATCGA CCCCACCCAA ATTTCTGCTA GTTATTGGAA TACACTTTGT
CGGTATGGTA GTCTTTATAA AAAAGCTGAT GGTGTTATGT TCGCCTGTGA AAAAGCAGTT
GCTCTTAACC CAAAAGAGGT CAATCTTATT GATAGTCGCG GACTGGCCAG AGCATTAACA
GGGGATATTG AAGGAGCGAT CGCAGATTTT CAAGCCTATG TAGACTGGAC AAGCAATGAA
GAGAAAAAAG CACAACGACA AGAATGGATA AAAGCACTTC AGGCAGGAGA AAACCCATTT
ACCGATAAAC TGTTGAAAGA GTTGAGGTAG
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| Protein sequence | MIDPDQNEVE LLSELIFALE MSQGDFRLFL ASCNYQTQRR RLMEKLQTSF SGDLAILEVD
ASVEKLYTTI GQHLGEQQPD GLMVWGLESN RNIDQILVSM GLVREEFKNN YQFPILLWID
QEISRKFIRL IPDFESWTSL TVFETTTPEL RDFIQQTSES VYQKILESGE GIFLDDADLG
LVESTYQKLL DAQQELTNRG ISLESELEAS LEFVLGRMAD NSTKIALDHY ERSLELWQQL
NNPLRVAHTY YYLGLWWQTY GFEHKAEKNM AYEKACSYFQ QVIEGFETVN RRDLVAKFIN
AWGTILQTLK RWDELNTVGN RAIELHKAYS YPFREARAYN FLAEFELANS NYKKAKKFSE
TAIKIFNQTL DYASSPTSNE DKKTLDWERY YHQGRYLFSL AKSEKGNGKI KSAIATLELA
KSTINPKYNH EFCIKIITEL REIYYQQKEY LKAFELKQEI QKIKQQFGLI AFIGPNYLRD
IKENINLALP QSKQRINQQK LTQEIAASGR ELDVEKLLER ISRNDHKLIV IYGESGVGKS
SILQAGLVPI LEAKPINTRD VVVVLQRVYV NWISELGTIL AEKLQIIPNL KVNSESLNSP
EAIFDQLKNN GNDKLNLLTV IIFDQFEEFF FAKTNMEPKD KRLFAEFLQK CLEIPFLKIV
FSLREDYIHY LLELNRLGNL DAINNDILSK NILYFLGNFS PDNAKLVIER LTENSLFKIE
KNLTEKLLED LGKQSGEIRP IELQVVGAQL QEDQITTLAK YQELGDNPQV ELVESSLKSV
VKDCGEENEK LAWVVLWLLT DENNTRPLKT KAELVKESQL NPEKLELALN IFVGSGLVFL
LPKKPAARYQ LVHDYLVWFI RQRKGDKIIE ELKLSRQEKK KNAITEANKS RELSLSGQRW
DGLMTAMKAR QKQIDSEFPA TDEASEITNA LRFAVYKRNK DDEFREINRI QGHENEVYGI
AFSPDGETIA SASADNTVKL WNREGKLLQT LTGHEKGVWD IAFSPDGETI ATASHDKTVK
LWNREGKLLQ TLTGHEKGVW DIAFSPDGET IATAGGDNTV KLWNRQGNLL QTLTGHENWV
YGIAFSPDGE TIATAGGDNT VKLWNRQGNL LQTLTGHEKG VYGIAFSPDG ETIASASGDN
TVKLWNRQGK LLQTLTGHKD SVWGITFSPD GETIATAGGD KTVKLWNRQG KLLQTLTGHE
NGVFGIAFSP DGETIATAGG DKTVKLWNRQ GKLLQTLSGH ENSVYGIAFS PDGETIATAG
GDKTVKLWNG QGKLLQTLTG HENGVNGIAF SPDGETIATA SHDKTVKLWN RQGKLLQTLT
GHKNWVLGIA FSPDGETIAS ASRDKTVKLW NREGNLLQTL TSHEKEVRGI AFSPDGKTIA
SASGTTVKLW NREGKLLQTL TGYENSVYGI AFSPDGETIA TASRDNTVKL WNRQGKLLQT
LTGHKNSVYG IAFSPDGETI ASASRDNTVK LWNRQGKLLQ TLTGHESSVE AVAFSPDGKT
IATASADKTV KLWTGWRIED LTKRGCQWLN DYLISHPQEL EELEICQTDK HKELAASSWV
IEGEKLAREG KVKEAVATFK KALKWNPDLK LNQNFKGLAA SLAEAERLME EGTTLAEEEK
IEAAVEKYQR AKELDKIAFI PTWQNLDPEA KARYQAVDAL LNKGLTLVTV GKVKEAIASY
QKAEKIDPTQ ISASYWNTLC RYGSLYKKAD GVMFACEKAV ALNPKEVNLI DSRGLARALT
GDIEGAIADF QAYVDWTSNE EKKAQRQEWI KALQAGENPF TDKLLKELR
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