| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3890 |
|---|
| Symbol | |
|---|
| ID | 4243553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6014785 |
|---|
| End bp | 6015126 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638108817 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_723399 |
|---|
| Protein GI | 113477338 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0608567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00481094 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTG TTGATATTGA TATCAAATAT ATTATTTTAG TTCCGCACCA ACACTTAGAC
CTGAACCACG CAAATGATAT GAAGGAGCAA TTTATATCTC TACGAGGAAA ACCATCCAAT
TTTTGGATTG TTGATATGGC AAATGTCGAG TCTATAGATA GTTCTGGTTT AAGTGTATTA
CTTACTGGTT TAGACATAGC TCGTAAAGAT GGTTATCGTT TAGTGATTTG TAACCTAAAT
CATCCTACAG TTAAGCTAGC TTTTGAGATT GCTCAATTAG ATAGAGTTTT TCAAATGTTT
AGTAATCTTG ATGAAATTTT TTCGTACTTT AACTTAAAGT AA
|
|---|
| Protein sequence | MKTVDIDIKY IILVPHQHLD LNHANDMKEQ FISLRGKPSN FWIVDMANVE SIDSSGLSVL
LTGLDIARKD GYRLVICNLN HPTVKLAFEI AQLDRVFQMF SNLDEIFSYF NLK
|
|---|
| |