Gene Tery_3757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3757 
Symbol 
ID4243705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5772259 
End bp5773647 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content39% 
IMG OID638108698 
Product2-isopropylmalate synthase 
Protein accessionYP_723282 
Protein GI113477221 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAAA TTGTAGATAG CACCCTAAGA GAAGGAAGGC AGACTGCCCC TGGGATAAAT 
TTTAGTTGGG AACAATCCCT GAAGATTGCT AAACTACTTC ATAGTCTGGG CATTGATATA
ATTGAAGTCT GCCACCCTGT TGTTTCTATT GAGCAAAAAC AAATTGTCCG AGAAATTGTA
GCTTCAAATC TCTGCCCAGT TATTGCTCAT GCACGTGCTA ATTTAGCTGA TATTGAGGCA
GTCAAAGAAA CATCGGCTCA ATGGGTTGGT ATATTCTTGG GAATTAATGA AGAAACTAGG
CTGACTCGTG CGAGATGGAC TATTAGCAAA ATTTTTAACT GCATCAAAGA GTCAGTAATG
TATGCCAAAA CCCTTGGTTT GAAGGTAAGA TATACTGCTG AAGATGCTTC TCGCACTGAC
TATTGTTTGC TAAAAAGCGT TTATAGTGTA GCTATAGAAG CTGGTGCAGA TTGCATTTGC
TTTTCTGATA CAGTAGGAAT CATGGAGCCT AATGAGGTTA CTGAGACGAT TGAAAAGTTG
AAGAGTGATT TTTCAACAGT ACCTTTAGAA GTCCATTTTC ATAATGATCG GGGTTTGGCA
ATGGCTAATG CTCTTGCTGC TTCTGATGCT GGCGCAGAAA GGATTTCTTC TTCTGTTAAC
GGGTTAGGGG AAAGATGTGG CATAACTGAT ACATTAGGTC TGTTAGTTAA TCTTTATTAT
AAGGGACTGC GTTCCCTACC GTCAGGAGAG ATAATTCAAC GAACAAGTAA GTATGTAGCA
GCTTTTTCGC GTTACCCTGT TAATTTTAAC CAACCAATCT CAGGGGGGAA TGCTTTTATT
CACACTGCTC ATCTACATCA AAAAGCAGTC AAACGTGATC CTTCTAGCTA TAGCTGGATT
TTGCCAGAAT ATGTGGGGAA AACTATGGAG TTATCTGGTA AAAGCATACC CTCTGTTCAT
TCTTTATTTC TTACACCAAT AGTAAAGTGT GCTAGTGAGC TTGGATATCA TAGATATGGA
GATAGTGTAG GACATTTGAT GATTGATGAG TGCATGGTTC CAAACTGTCG GCAATCTTGT
ATTGTACGTG AAATAAGAGT GGTGGAAGAA AAACCTCTTG CTTATGTGGA TGTTCAGACT
CTTTATGTAG ATAGCTTGTT CTTGTTTTTA GGTCACGAAC TTGGTATGAA AGGATTGCAG
GTTGAAGTAT GTCTAGGACA AGTTGTTCAA AAAATTGATA GTCCAGCAAG TGTGTTTATT
CCAGCAGGTG TAGCTCACAC TTATCGAATT CTTAATGGTA GTGGCTTTTG CATAAACCAC
GTTCTTTCTG GTTCTTATAA TGATAGTCTT TTAGAACCTT TAGATATATC TAGCAATAGT
TATAGCTGA
 
Protein sequence
MVQIVDSTLR EGRQTAPGIN FSWEQSLKIA KLLHSLGIDI IEVCHPVVSI EQKQIVREIV 
ASNLCPVIAH ARANLADIEA VKETSAQWVG IFLGINEETR LTRARWTISK IFNCIKESVM
YAKTLGLKVR YTAEDASRTD YCLLKSVYSV AIEAGADCIC FSDTVGIMEP NEVTETIEKL
KSDFSTVPLE VHFHNDRGLA MANALAASDA GAERISSSVN GLGERCGITD TLGLLVNLYY
KGLRSLPSGE IIQRTSKYVA AFSRYPVNFN QPISGGNAFI HTAHLHQKAV KRDPSSYSWI
LPEYVGKTME LSGKSIPSVH SLFLTPIVKC ASELGYHRYG DSVGHLMIDE CMVPNCRQSC
IVREIRVVEE KPLAYVDVQT LYVDSLFLFL GHELGMKGLQ VEVCLGQVVQ KIDSPASVFI
PAGVAHTYRI LNGSGFCINH VLSGSYNDSL LEPLDISSNS YS