| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3730 |
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| Symbol | |
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| ID | 4243906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 5717512 |
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| End bp | 5719536 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638108673 |
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| Product | exoribonuclease II |
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| Protein accession | YP_723259 |
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| Protein GI | 113477198 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0886266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGAAGG GAAAATTAAT AGAATTTAGA CTGCACGGAG AGCGTAGACT AGCTGTGGCA
GATCGTCCAG ACGGTAAAAA AAATTGGGTC GTGATAGAAG CAAATGGTAA GTCTAATAGT
ATACCCCCAA AGCAAATAAG TTATGAAGTA GGAGGAGAAA GTTATCAATC ATCAGAAATT
CCCCAGTTTA TTCAGGAGGT AAAAACTTAC CTGGATCCTT CTAGTTTAGA AGTAGCATGG
GAATTGCTAG TAGAAGAAGC AGAAGCAGTA AATCCAGAAG AAATGGCCCT ATTGCTATTT
TCAGAACAAA CACCGATCCA ATGTTATGCA GCTTATATAT TATTATCGGA TGATAAACTC
TACTTTAAGC AAAAAGGCGA TCGTTACGAA CCCCGCTCTG TAGCCCAAGT AGCAGAAATT
AAACATCAAC AAGAAGTCCA AAAACAACGA AAAGAAGAAT TAGAGAACTT TTTACTGCGG
GTGCATAACC GACTAGCAGG GGAAAAGGTA GAATGGGAAC AAAGTGATTA TAACCGCCTA
GACATCATAG AAAAATTTGC GACTCATGGA GAAGAAACTT CCCATCGTAG TCAGGCCATG
GAAACTTTGG CTACCTTAAA AGTACCAGAA ACTTCAGAAG CAGCATTTAA ACTATTAGTG
GATCTAGGTA TATGGAGTGA GCATGAAAAT CTATATTTGC GACGTAGCCA GATCCCAAAA
TGTTTTTCTA CCAAGGTACT AGAAGTGGCC AAAAGCTGCC TGCAATCCCT CCCACCAGAT
CCAGAAACAA ACCGTTTGGA TTTAACTCAT TTAAAAGTCT ATACAATTGA TGATGAAAGT
ACCCAAGAAA TAGATGATGG CCTGAGCATA GAATTTTTAG AAGATGGTCA ACACAGGATA
TGGGTACATA TAGCTGACCC AACTCGTTTA CTTATTCCTG GTGATGAGTT AGACCTAGAG
GCCAGACGCA GAACGACTAC TTTATATTTA CCTACTGGTA TGGTTCCTAT GTTTCCCCCA
GAGTTGGCCA CAGGGCCAAT GAGTCTAATT CAGGGACAAG TGTGCAGAGC TTTGAGTTTT
GGCATTCTTT TAGATGAAAG TGGGGCAGTT ATAGATTATA TAATTCATGC CAGCTTAATC
AAACCGACTT ACCGTCTTAC TTATGATGAT GTGGATGAAA TGCTACAGTT GAAGATTAAG
CTAGAACCAG AAATTCATGC TCTGAATGAT TGGGCTAAAC AAAGATTTAA GTGGCGACAG
TCACAAGGCT CGATTAGTAT TTATATGCCA GAGTCGGTAA TTAAAGTGAA AGGTGAAGGT
GAAGAAATTA CGGTAGAAGT ATTGGATGAT TCACCTTCAA GACAGCTAGT AGCGGAAATG
ATGATTTTGG CAGGGGAAGT GGGGGCAAAA TATGGTCAAG AAAATAATAT TCCTCTACCC
TATCGTAGTC AACCTCAACC TGAACTTCCA CCAGATGCAG AACTAATGTT GTTGCCAGCA
GGACCAGTTC GTTCTACAGC TATGCGTCGA TGTATGCCTA AAAGTGAAAT GGGTACTATA
CCAGCTCGTC ATGCAAGTTT GGCTTTAGAA ACTTATGTTC AGGTTACTTC TCCTATTCGG
CGTTATAGTG ATTTATTGGC CCACTTTCAG ATTAAGGCTC ATTTGCGGGG TGATCCGTTA
CCTTTTACTC TAGAACAAAT GCAAGAAATG GTAATGAGTT TAGTTCCGGC GGTGAAGGAA
GCTTCTAGTG TGGAAAGGTT TACTAACCGT TATTGGGGTT TGGAATATTT ACGCCGTAAT
TCTGGTGAGG TTTGGCAGGC ATTGGTAATT CGGTGGTTGA AAGAAGAAAT TAATTTAGGG
TTGGTGTTGT TGGAAGAGTT GGGGTTAGAG TTGGCTATGC GGTTTGGTAG ATCAGTTGAA
GTGGGCGATC GCTTAGAGGT AAAGGTTGCT CATGCTGACC CTCGTAGAGA TGAGATTGTA
TTTCAAGAAA TTGTGAATAA CGTTGCAGAA AAAGTTAATA ATTAA
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| Protein sequence | MEKGKLIEFR LHGERRLAVA DRPDGKKNWV VIEANGKSNS IPPKQISYEV GGESYQSSEI
PQFIQEVKTY LDPSSLEVAW ELLVEEAEAV NPEEMALLLF SEQTPIQCYA AYILLSDDKL
YFKQKGDRYE PRSVAQVAEI KHQQEVQKQR KEELENFLLR VHNRLAGEKV EWEQSDYNRL
DIIEKFATHG EETSHRSQAM ETLATLKVPE TSEAAFKLLV DLGIWSEHEN LYLRRSQIPK
CFSTKVLEVA KSCLQSLPPD PETNRLDLTH LKVYTIDDES TQEIDDGLSI EFLEDGQHRI
WVHIADPTRL LIPGDELDLE ARRRTTTLYL PTGMVPMFPP ELATGPMSLI QGQVCRALSF
GILLDESGAV IDYIIHASLI KPTYRLTYDD VDEMLQLKIK LEPEIHALND WAKQRFKWRQ
SQGSISIYMP ESVIKVKGEG EEITVEVLDD SPSRQLVAEM MILAGEVGAK YGQENNIPLP
YRSQPQPELP PDAELMLLPA GPVRSTAMRR CMPKSEMGTI PARHASLALE TYVQVTSPIR
RYSDLLAHFQ IKAHLRGDPL PFTLEQMQEM VMSLVPAVKE ASSVERFTNR YWGLEYLRRN
SGEVWQALVI RWLKEEINLG LVLLEELGLE LAMRFGRSVE VGDRLEVKVA HADPRRDEIV
FQEIVNNVAE KVNN
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