Gene Tery_3494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3494 
Symbol 
ID4244494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5386630 
End bp5387172 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content36% 
IMG OID638108468 
Productresponse regulator receiver protein 
Protein accessionYP_723057 
Protein GI113476996 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.342019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGGAC ATAAAATTTT AGTTATTGAT GATAGTAAGG TCATTAGAGT CAGAGTCAAA 
GAAATGCTTC CTCAAGGAAA CTTTAATGTT TTAGAAGCAA AGGATGGCCA AGAGGGACTT
ACAAATATTC TAAAGGAACG TCCTAACTTA ATTATGTTGG ATTTTTTACT GCCTAAAGTG
ACTGGTTGGC AGGTATTTCA AAAAATTCAA TCCCAACCTC AATTAAAAAA GATTCCGTTG
GTACTTATGT CAGGTCGTAA GGAAGAGGTA GCAGAAAAAA TTCCTGAACC CTTTGAAAAA
CATTATTTTG CCTTTCTAGA AAAACCTTTT GAGAAAAAAG AATTAACAGC AGCTATTCAA
TTAGCTTTTC AGTTGGCCAA AAAACGTCCT ACTGAGGCTC AACCTCAGAG TACAGTAGAT
GGGGGAGATA GTTCTGGCAA AATACAGGCA TTGGAAGCTA AAGTTAAGAA AATGGAGTCT
GAAATAGTGA CATTGAAAAA ACAAATGACT CAACTTGTAG CTATTGTCAA AAAGTTGAAG
TAG
 
Protein sequence
MAGHKILVID DSKVIRVRVK EMLPQGNFNV LEAKDGQEGL TNILKERPNL IMLDFLLPKV 
TGWQVFQKIQ SQPQLKKIPL VLMSGRKEEV AEKIPEPFEK HYFAFLEKPF EKKELTAAIQ
LAFQLAKKRP TEAQPQSTVD GGDSSGKIQA LEAKVKKMES EIVTLKKQMT QLVAIVKKLK