| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3493 |
|---|
| Symbol | |
|---|
| ID | 4244493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 5384892 |
|---|
| End bp | 5385815 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638108467 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_723056 |
|---|
| Protein GI | 113476995 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAATT CAATTAAGAT GAAAGCCCAA ATTCAGAGTA TGCCAAAGTG GCTGCGCCCC
TCTTTGGGTA AAGCTAGTGA GATTTCTACT GTACAAAAAA CTATCAAACA GCGTCAGCTC
CATACAATTT GTGAGGAAGG TCGCTGTCCT AACCGAGGAG AATGCTATGC CCAAAAAACT
GCTACTTTTT TGTTAATGGG TCCTACCTGT ACTAGGTCTT GTGCTTTTTG TCAAGTAGAT
AAGGGTCACG CTCCAATGGC TTTGGACCCA GAAGAACCGC AAAAAGTAGC GGAAGCAGTG
GAATTATTGG GTTTGAAGTA TGTAGTACTG ACTTCTGTAG CTAGAGATGA TCTCTCTGAT
GGTGGTGCTA GTTGGTTTGT AGCTACAATG ATGGCTATTA GGGATCGGAA GCCAGAGGCG
AAAATAGAGG TTTTGACTGC TGACTTTTGG GGTGGTCAGA AGGTCAGGGG GGCTGAAAAG
TTATCTGTTC CTCTAGCTCA AAGACAAAGA AAACGGATTG AGATTGTGGT AAATGCTGAA
CCAGCTTGTT ATAATCATAA TATTGAAACG GTTTCTAGGT TGCAAGGGCC TGTACGTCGT
GGGGCCAAAT ATCAGCGATC GCTTGATGTA TTGCGAATTG TTAAAGAGTT AAACCCCAGT
ATTCCTACTA AGTCTGGTTT GATGTTGGGA CATGGAGAAA AGGAAACTGA AGTGGTAGAA
GCAATGGGAG ACTTGAGAAA GGTAGGATGC GATCGCATAA CTCTGGGTCA GTATATGCGA
CCTTCCCTGG CACATTTACC AGTACAAAAA TATTGGACAC CAGAAGAATT TGATCATCTT
GGGGCGATCG CTCTTTCAAT GGGCTTTTCT CATGTTCGTT CTGGCCCCTT AGTTCGTAGC
TCCTATCATG CTGGAGAGAT ATAG
|
|---|
| Protein sequence | MVNSIKMKAQ IQSMPKWLRP SLGKASEIST VQKTIKQRQL HTICEEGRCP NRGECYAQKT
ATFLLMGPTC TRSCAFCQVD KGHAPMALDP EEPQKVAEAV ELLGLKYVVL TSVARDDLSD
GGASWFVATM MAIRDRKPEA KIEVLTADFW GGQKVRGAEK LSVPLAQRQR KRIEIVVNAE
PACYNHNIET VSRLQGPVRR GAKYQRSLDV LRIVKELNPS IPTKSGLMLG HGEKETEVVE
AMGDLRKVGC DRITLGQYMR PSLAHLPVQK YWTPEEFDHL GAIALSMGFS HVRSGPLVRS
SYHAGEI
|
|---|
| |