| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3322 |
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| Symbol | lpxB |
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| ID | 4243493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 5096954 |
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| End bp | 5098195 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638108307 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_722898 |
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| Protein GI | 113476837 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.731526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAACC CCCCATCTCC CATCAAAATT TTTATTAGTA CAGGTGAAGT TTCTGGAGAT
TTACAAGGTG CTCTGTTAGT TGAGGCACTC TACCGCCAAG CTCAACTTCA GGGTTTAAAT
GTGGATATTG TGGCTTTGGG GGGAGATCGC ATGGCTACTG CTGGTACTAC TTTGTTGGGC
AATACAACTA AAATTGGTTC TGTAGGAATT GTTGAGTCTT TACCTTTTGT TTTCCCTACT
CTGAAAATTC AAGAAAAAGC TAAGGAATAT CTACATCAGC AGTCTCCTAA TATAGTTGTT
TTAATTGACT ACATGGGGCC TAATCTCAGT ATTGGTAGTT ATATTCGCAA AACCTGGCCA
AATTTGCCGA TTATTTGGTA CATTGCTCCT CAAGAATGGG TTTGGTCTCT GGGAAAGGAT
AAAACAGCTA AAATAGTGAG TTTTGCGGAT AAACTTTTAG CTATTTTTCC AGAGGAGGCA
AGTTATTTTC GCCAACAGGG AGCTGATGTT ACTTGGGTAG GTCATCCAAT TATTGACAGG
ATTAAAATGG CTCCTACTAG GGAAAAAGCT CGTAGTACTT TGGGTATAGC TCCTGATACA
TTGGCGATCG CTTTATTGCC TGCATCTCGG CAACAAGAAG TGAAATATTT AATGCCTGTA
ATTTTTCAGG CAGCTCAAAT AATTCAGAAA AAATTACCCC AGGCTCATTT TCTGATTCCT
CTATCTTTAG AGATTTATCG TGATGCTATC ACGGAGGGAA TTAATAAGTA TCAACTGCAG
GCAACAGTTT ATCCATCTTT TCCACAAAAT AGTGACGAAA TACAAGAAAG GAACAATTTA
GAAATTCTGG CTGCAGCTGA CTTGGCGATC GCTAAATCTG GTACTGTAAA TTTAGAAATA
GCTTTGCTAA ATATACCTCA AGTAGTAATA TATAAAGTTA ATCCTATAAC TGCTTGGATT
GCTAGAAATA TTCTGAGGTT TTCTATTCCA TTTATTTCTC CACCTAATCT AGTACAAATG
AAGTCTATTG TACCGGAATT ATTTCAAGAA AATGCTAATC CTGAAAATAT TGTTTCTGAA
GCTTTGGAAC TTTTATTAAA TTCTCAACGC CGTGCTCAGA CATTAAATGA TTATCAAGAA
ATGCGTCAAT CTTTGGGAGA AGAAGGAGTT TGTAATCGCG CAGCTCAAGC AATTTTGGAT
TTAGTTTTAA CCAGAAAATC AAAATCTTTT TCAGATATTT AA
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| Protein sequence | MLNPPSPIKI FISTGEVSGD LQGALLVEAL YRQAQLQGLN VDIVALGGDR MATAGTTLLG
NTTKIGSVGI VESLPFVFPT LKIQEKAKEY LHQQSPNIVV LIDYMGPNLS IGSYIRKTWP
NLPIIWYIAP QEWVWSLGKD KTAKIVSFAD KLLAIFPEEA SYFRQQGADV TWVGHPIIDR
IKMAPTREKA RSTLGIAPDT LAIALLPASR QQEVKYLMPV IFQAAQIIQK KLPQAHFLIP
LSLEIYRDAI TEGINKYQLQ ATVYPSFPQN SDEIQERNNL EILAAADLAI AKSGTVNLEI
ALLNIPQVVI YKVNPITAWI ARNILRFSIP FISPPNLVQM KSIVPELFQE NANPENIVSE
ALELLLNSQR RAQTLNDYQE MRQSLGEEGV CNRAAQAILD LVLTRKSKSF SDI
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