| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3235 |
|---|
| Symbol | |
|---|
| ID | 4243656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 4951721 |
|---|
| End bp | 4953925 |
|---|
| Gene Length | 2205 bp |
|---|
| Protein Length | 734 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638108232 |
|---|
| Product | tetratricopeptide TPR_2 |
|---|
| Protein accession | YP_722823 |
|---|
| Protein GI | 113476762 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAATG AGGTTATGAG TGCTGGACAA TTGTTGAAGC AGGCTAATCA GTTGAAGAGG
GCTGGGAGGT TGGATGAGGC GATCGCTCTT TATTATCAGG TGATTGAAAT TAATCCTAAT
TTTGCTTGGG CATATAATAA TTTAGGAGAT GCTTTAGTTA AACAGGGTAA TTTAGACGAG
GCTGTTGCTT ACTACTTTGA AAGCTTAAAA CTGAATCCAA ATTCAGCTTG GTTACTTTAT
GGCTTAGGGG AAGCTTTAGC CAAACAGGGA AATTTAGAAG CTGCTATTGA ATACCTGCAA
AAAGCTATTA AAACTAAACC TGATTTTTAT AAATTTTACA GTTGTTTGGG ATTTATTTTA
GCTGCTAACA ATAATTTGAA CGAGGCTGTT GTTAATATTT ATAAGTCACT TAGATTAAAT
AAAAATTGTT GGTGGAGTCA TTACTTTTTA TCACAATTAT TAATAGAAAA AGGAGATTTG
CATGAAGCAT TTTACAACTA TGCTAAAGCC ATTGAACTTA ATCCTATAGC TGAAAAAAAA
TCATTGATTC ATAAAAATAA AAGTAGTTTT ATTTCATTAT TAGAAAAAAC AGATGTTAAG
ATAAGCTTAT TAGAAGAAAT CAAAAACTTA AAAATCCACA AAATACTACT GACCACCCAT
AATTTCAAAA TCTACTCCGG CTCTGAGTTG GTGACGTTGT ATTTAGCTCA AGTCTTTGCT
GATATAGGTT TAGATGTAAC AATTGTCTCT TTCGTGACAG GAGAACCTAT GATTTCTACA
GCTGCTTCAA ACAATATAGA AATCATTAAT GTTATCCAGA ATCCCATGAA AATAAAGCAA
AGAAAGTTTG ATTTAGCATG GTGTCACCAC TTTCCTGTTA TTGACTATTG TGTAAATGAT
TTGGAAGTAA ATGCTAAATT TATGGTTTAT AGCAGTCTCT CAGCTTACGA ACCTCTCGAA
AAAATGACTT ACTTAGAAAC ATCAGATGTA GTTCTTTTCA ATTCTAAAGA AAATCAACAC
ATTCAAGCTT ATAGTCTTGA TGAAAAGTAT CAGCAAAAGA TATTCGTTTT CAATAATTCA
CTACCAGAAA ACTGGTTTTT AAGCCTAAAA CAGTCTGTAC CTGGCAATAA AGGAAAGCAT
TTGCTACCTA AAAACATAGC AGTGATATCT AATCATATTC CACCCGAAAT TAAAAAGCTA
CCTGACTTAC TTAATGATTG TAACATAAAA GTTAAGTTCA TAGGATTAGA AACTAAACAG
GAGCTAGTTA CACCAAAGTT AATAGATACT TATGATGCAG TGATTACAAT AGGTCATACA
GTTCAAAAAG CTATGAGTAG AAAAATACCC GTTTACTGCT ATGATAGATT TGGCGGACCT
GGCTGGATTA CGAAGGGTAA CTTAATTGAT GCTGAATACT TTAACTTTTC TGGTAGATGC
TGCAATAGAA AGCTAAATAC TGAAAGTATA AAGGATGAAA TTATTCAAGG GTATAAAACA
GCTATTGAAA GCTTAAACTA TCTTTTCTAT TACTCTGAAT TTCTGTATTC AACAGAAGCA
AATGTATTAG CTGTACTTCA AAAACTCAAA TTATCAGATA CTACTTTTGT AGAAAAACTA
AACTATCACT CCTTAGAAAG CTACCAAATT AGAAAAACAA GTCAGTTGTA CATAAATACT
AAATTTCATG TTGGAAGTAA AATATCAATA GTTTACCTTA AGGATGGGTT GAAGAAATTC
GATAGTTCAG GCTCTCAAAT AAACCTGAAA ACGAATGATA ATGCCAATGT AGAAACGACT
AACTACAAAC CAAAAGTAGA AGTATTAAGT GTAGCCAAGT TTTTTGAATA CGATCCGTCT
CTACTATGGG GGTTTAACAT TGAATATCCA GTAGAGTCAG ACATAAAGTA TGAATACAAG
ATTCCTTTAT CTGGATGGGT TCTGGGAAAA GCATCTACTA TTATTGCTAT TGATGTCATA
ATTGACGATA CTTTAGTTAA GCAGATTCCC CTCGATCAGC ATCGTCCAGA TGTTGCTGAA
GCATACCCTG ACAACCCTTC TGCTACAAAT TGTGGATTTA TGACAGAAGT TAATGTCGAT
GGAATGCCTG TAGAAGCAGA ATTATCGATA GAAGCTGTAT TTTCAGATGA TAACCGCTTG
CCCCTGGGAA TTGTCAAATA CAAGAAAATA CTACCATCAT CTTAG
|
|---|
| Protein sequence | MGNEVMSAGQ LLKQANQLKR AGRLDEAIAL YYQVIEINPN FAWAYNNLGD ALVKQGNLDE
AVAYYFESLK LNPNSAWLLY GLGEALAKQG NLEAAIEYLQ KAIKTKPDFY KFYSCLGFIL
AANNNLNEAV VNIYKSLRLN KNCWWSHYFL SQLLIEKGDL HEAFYNYAKA IELNPIAEKK
SLIHKNKSSF ISLLEKTDVK ISLLEEIKNL KIHKILLTTH NFKIYSGSEL VTLYLAQVFA
DIGLDVTIVS FVTGEPMIST AASNNIEIIN VIQNPMKIKQ RKFDLAWCHH FPVIDYCVND
LEVNAKFMVY SSLSAYEPLE KMTYLETSDV VLFNSKENQH IQAYSLDEKY QQKIFVFNNS
LPENWFLSLK QSVPGNKGKH LLPKNIAVIS NHIPPEIKKL PDLLNDCNIK VKFIGLETKQ
ELVTPKLIDT YDAVITIGHT VQKAMSRKIP VYCYDRFGGP GWITKGNLID AEYFNFSGRC
CNRKLNTESI KDEIIQGYKT AIESLNYLFY YSEFLYSTEA NVLAVLQKLK LSDTTFVEKL
NYHSLESYQI RKTSQLYINT KFHVGSKISI VYLKDGLKKF DSSGSQINLK TNDNANVETT
NYKPKVEVLS VAKFFEYDPS LLWGFNIEYP VESDIKYEYK IPLSGWVLGK ASTIIAIDVI
IDDTLVKQIP LDQHRPDVAE AYPDNPSATN CGFMTEVNVD GMPVEAELSI EAVFSDDNRL
PLGIVKYKKI LPSS
|
|---|
| |