| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3213 |
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| Symbol | |
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| ID | 4243808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 4913653 |
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| End bp | 4917567 |
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| Gene Length | 3915 bp |
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| Protein Length | 1304 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638108214 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_722805 |
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| Protein GI | 113476744 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.297689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.929062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATAC AAAAAAATCA AGAATATAAT TATCAAATAG GTAATTATTT AACAGCAAAT
CATCCTACTT ATGTCATACG AGCGGCAGAT AAAGAATTAT TTAATACTTT GAAAAACGGT
GAATATTGTT ATGTATTAAG TTCTCCACAA ACTGGTAAGT CAAGTTTAAA AGTTAATACG
ACCCAACTTT TACAAGCAGA AAACATTATC TGTATTGCTC TAGATATGAG TAGAGTTAAC
AATAAAACTT TTACTCTAGA TGAGTGGTAT GATCAAGTAA TTTTAGCTTT AGAAAAAAGT
TTTACATTTC CACGGTATTT TCCAGAATTA TGGTGGGAAG AAATGGCAAA TATGCCAGGG
GATGAAAAAT TATTTGTGTT TATAGAGGAA GTATTATTAG CTAATACTCA AGATGAAAAG
ATAGTCATTT TTATAGATGA AGTGAATGAT GATAGTGTTT TTGACCCTGG TGGTGGGAGC
TTAGGAATAT TAATTAGTTA TTGTCTTCAA GAAAGAGCAA ATAACCCAGA ATTTAAACGT
TTAACATTTG CCTTATTAGG GACAACAATA CCTAATAATT TAGTGGATAT TTGTAGACCT
ATTGAACTTA GTAGCTTCAA AATAGAAGAA GTGCCTCATT TTGTAAACAG ATTCCAAGGG
ATGGTAAAAC AGCCACTAAA ATTTATAGAA GAAATATTAT TTTGGTCTGG TGGACAACCA
TTTTTGACGC AAAAACTATG TCAAATAGTT ATTAATTATT TAAGAGAAAG AAATGAGGAA
GAAGATGATA ATAATGTAAC TTTAGTAGAA GATTTAGTGG GAATTTGTGT GTTAGAAAAT
TGGGATGCAC AAGACTATCC AGCTCATTTC AGCAAATTAG AAAATCTTTT GCTGAAAAAT
ATACAGAAAT CTACAAATCA TTTAGAAATA TACCAACAAA TATTAAAATA TGGCAGATTA
AAACTACCTA GTGAAAGTAA TCAGAGATTT AAAAATCATG CGATCGCTCA TAGCAAATGG
GAAATAAAAG AGTTATTGAG GTCAGGTATA GTCAAAATAA ATCAGGGATT TTTAGAAGTA
TATAGTCCTA TTTATGCAGA AATTTTTAAT CAAGAATGGG TACAAAAACA TCTACTACAA
AGAACTAAGT CTGTTCCTAA AGTTACTGAG GAAAAAATTG AGTTAAATGA TTCAAATGCT
GAGGCAAAAA CTTGGCAAGT AGAAGCAAAT GTATCTAATT TTGAAATCCC AGAAAATCAA
AAAAATTATA GTCATAATGA AATTAATTCA GAACAAAAAT TACTAGTAAA CCCATTTAAA
TTAAAGAATT TCAACAATCA AGTCACAAAT TTTCAACTAG GAGAAAATTT CTCTGGCTTA
GAAAGTCAAG ATAATCAAAA AAATCAGAGT AATAATATTA TTGATCCTGA ACAAAAACAA
TTAGAAAATT TATTAGATTT AAATCAGTTT GATAGTTCAG TGACTAACTT AAATTTAGAA
GAAAATATTT CTAATTTGCA ACTTTTTGAA AATCACCAAA TTCAAAGTAA TAATTTAATT
CATCCACAAC AAAAAGAACT AGAAACACCT GGAGAAAAAA TCACTCATCA GAAAAATAAT
AAGAATCAAG TAAGAGACAA AAAAGCTAAA AAATTAGCAA TATCTCAGCA TAAACTAAAT
ATAGGAATAG CAGGATTAGT CGTAGTATCC CTAATAGCTA TAACTGGAGC AACTTGGGCA
ACTAAACTTT TTCAAGAGAA ACAAACTCAA CTTCAAAAAG CAGAATATCA ATTAGAACAA
TTCAAATATG AACTTAAAGA AGCACAAAAA GGTAAAGAAT TAGAACATGA AGGAATTAAT
GCTCTAAGGC AATTTGAAAC TGCAGAAATA GAAGCATTAA TATCAGCAAT GAAAGCAGGA
ATTAAACTAC AAGAATTAGT TAAATATGGT CGCCCACTCC AACATTACCC AGCCACAAGT
CCGATATTTG CCTTACAACA AATTATTAAC AATATTCACG AAAAAAATCA AATTCCTAAC
ATCAAAAATA TTGCTATGAG TCCTAATAAT CAACTATTAG CTATAGTCAG TAATGATGGT
ACAGCTAAAA TTCTGGAATT CTCAGGTGAA CCTATTTCTC AGTTGAGAGG ACATCAGGGC
AAAATCTCTC AAATTAAGTT TGCCCCAGAA GGTAACCTTC TTGCTACGGC AGCAGATGAC
GCTACAGCTA GAATTTGGGA TTTTCAGGGT AAGCAACAAG TAGAACTCAA AGGCCATAAA
GGTCAAATTT GGGAAATTAC CTTTAGTCCT GATGGTAAAT TATTAGCTAC TGCTGGAGAA
GACGGCACTG CTAGAATTTG GGATATCTCA GGTCAAAAAA TAGCCATTCT CAAAAAACAT
CAAGGTCGCA TCTTAGACAT CACATTTAGC TCTGATGGAA AATATCTAGC TACTGCTGGA
TGGGATGGTA CTGCCAGAAT TTGGAGTCCA TCAGGCAAAC AATTAGCTAT ACTTAAGGGA
CATCAAGGTA GTGTAGAAAA AATTATATTT AGCCCTAATG GAAAATATCT AGCTACGACT
GGATGGGATG GCACTATTAG AATTTGGAGA CGTAGTTCCG GTAAGCTATT ATCTAAACTT
AAAGGTGGAG TTTGGAATAT TAGCTTTAGT TCCGATGGTA AAAGGTTCGT TACAGCGGGA
GAAGATGGAA CAGCAAATAT TTGGAATGTT TCTGGCCAAC TATTAGGGAA ACTTCCTGGA
CATCAAGGAA CTGTGACGAG TATTAGTTTC AGTCCTGATG GTCAATGTCT AGCTACAGCA
GGCAATGATG GTAGTGTAAA AGTCTGGGAC AATAATGGAA ATTTGTTGAC ATATCTTAAA
GGACATCTTG GCCGGGTTTT GGAAATGAAT TTTAGTTCTG ATGGACAATT ACTATTAACT
TTGGGAGAAG ATGGTACAGG TAGAGTTTGG GATCTAGAAG CTAATTACGA GGCCAAAATT
CAGGGTAATT CTGAGATTTT TGGGGGGGTA AGTTTTAGTT CTAATAGTGA GAAATTAGCA
ACAGTTGCAG TTGATGGTGT TACCCGTATC TGGGATATTT CTGGAAATCT TTTAACTGAA
TTTAATGGAT CTTTAGGTAT GTTTGGCGAT ATGAGTTTTA GTCCTGATGG TAAATATCTG
GCGACTGCTG GAGATAATAG CCAGGCAAGA ATTTGGCAGG TTTTAGGAGG AGAGTTAATA
GAGTTAGAGG GTGAGGAAGG GATGGCAAAA CAGATTAGTT TTAGTTTCGA TGGACAACGC
TTGGCAACGG TGGGAGAAGA TGGTGTGGCT CGCATCTGGA ATAATTCTGG TGAGCGGTTG
GTTGAGTTAA AGGGTCATAA TGGGCGAGTT TTGGATGTAG ATTTTAGTCC AGATGGAAAA
TATATTGGTA CTGCTGGAGA GGATGGTGTT GGGAAAATTT GGGATAGTTC TTTTCGACTG
GTTTCAGAAT TAAAAATTGT TTCTAGTTGG ATGGAGAGTA TTGGTTTTAG CCCATCAGGA
GAGTACATAG CTACGGGAGA TAGTAATGGA ATGGTCAAAA TATGGGATTT TTGGGGCCAT
CAAATTGCTG ATTTAAAAGC TCATATTGGT AGTGTGAAAA ATGTTACTTT TAGTGCTGAT
GAGGAACAGG TGATAAGTAT GGGAAAGGAT GGAATGGTGA GAATTTGGGA TATTACAGGA
CGACAAATAG GTCAATTTGA AAATGCTAAG GGTTTAAGTT TGGATGGTAA ATATATAGCA
ACTTTGGCAG ATAATGATTT GGAGTTATGG CAGGTGAAAG GGTTAAATGA TTTATTAAAA
AGTTCTTGTA ATTGGCTTGA GGATTATTTT ATCACTCATC CAGATGTGAG GAAAGATTTA
GAAGTTTGTG AGTAA
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| Protein sequence | MNIQKNQEYN YQIGNYLTAN HPTYVIRAAD KELFNTLKNG EYCYVLSSPQ TGKSSLKVNT
TQLLQAENII CIALDMSRVN NKTFTLDEWY DQVILALEKS FTFPRYFPEL WWEEMANMPG
DEKLFVFIEE VLLANTQDEK IVIFIDEVND DSVFDPGGGS LGILISYCLQ ERANNPEFKR
LTFALLGTTI PNNLVDICRP IELSSFKIEE VPHFVNRFQG MVKQPLKFIE EILFWSGGQP
FLTQKLCQIV INYLRERNEE EDDNNVTLVE DLVGICVLEN WDAQDYPAHF SKLENLLLKN
IQKSTNHLEI YQQILKYGRL KLPSESNQRF KNHAIAHSKW EIKELLRSGI VKINQGFLEV
YSPIYAEIFN QEWVQKHLLQ RTKSVPKVTE EKIELNDSNA EAKTWQVEAN VSNFEIPENQ
KNYSHNEINS EQKLLVNPFK LKNFNNQVTN FQLGENFSGL ESQDNQKNQS NNIIDPEQKQ
LENLLDLNQF DSSVTNLNLE ENISNLQLFE NHQIQSNNLI HPQQKELETP GEKITHQKNN
KNQVRDKKAK KLAISQHKLN IGIAGLVVVS LIAITGATWA TKLFQEKQTQ LQKAEYQLEQ
FKYELKEAQK GKELEHEGIN ALRQFETAEI EALISAMKAG IKLQELVKYG RPLQHYPATS
PIFALQQIIN NIHEKNQIPN IKNIAMSPNN QLLAIVSNDG TAKILEFSGE PISQLRGHQG
KISQIKFAPE GNLLATAADD ATARIWDFQG KQQVELKGHK GQIWEITFSP DGKLLATAGE
DGTARIWDIS GQKIAILKKH QGRILDITFS SDGKYLATAG WDGTARIWSP SGKQLAILKG
HQGSVEKIIF SPNGKYLATT GWDGTIRIWR RSSGKLLSKL KGGVWNISFS SDGKRFVTAG
EDGTANIWNV SGQLLGKLPG HQGTVTSISF SPDGQCLATA GNDGSVKVWD NNGNLLTYLK
GHLGRVLEMN FSSDGQLLLT LGEDGTGRVW DLEANYEAKI QGNSEIFGGV SFSSNSEKLA
TVAVDGVTRI WDISGNLLTE FNGSLGMFGD MSFSPDGKYL ATAGDNSQAR IWQVLGGELI
ELEGEEGMAK QISFSFDGQR LATVGEDGVA RIWNNSGERL VELKGHNGRV LDVDFSPDGK
YIGTAGEDGV GKIWDSSFRL VSELKIVSSW MESIGFSPSG EYIATGDSNG MVKIWDFWGH
QIADLKAHIG SVKNVTFSAD EEQVISMGKD GMVRIWDITG RQIGQFENAK GLSLDGKYIA
TLADNDLELW QVKGLNDLLK SSCNWLEDYF ITHPDVRKDL EVCE
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