| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2994 |
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| Symbol | secY |
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| ID | 4245110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 4647560 |
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| End bp | 4648900 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638108029 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_722622 |
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| Protein GI | 113476561 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.389258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0673077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACATTA GTAGAGATAA GGCACCAACT GCTCAAGAGA CATTCTTGCA GATGGCCCAA
GCAGCAGGAT TGCGAGGGCG ACTGCTAGTA ACAATAGGTT TACTTCTATT AGTGCGTTTA
GGTGTTTATC TACCAGTACC AGGAATAAAT AGAGAAGCTT TTCAAGCTAG AATTGGAGAC
CAGGCTTTAA CAGGCTTCCT AGACCTTTTT TCTGGTGGTG GTTTTTCAGC ATTAGGTATT
TTTGCATTAG GGATTATACC TTACATTAAC GCATCAATTA TTATTCAATT GATGACGGCA
GCGCTACCAA GTTTAGAAAA CTTGCAAAAA AATGAGGGTG AGGCAGGACG TCGAAAGATT
TCTCAAATTA CTCGCTATGT AGCACTGGGT TGGTCGGTTT TACAAAGCTT TGGTTTAGCT
ATATATCTTA ATAGCTCATC TGTAGATATT AATGGAGAAC TGGTAACTGT ATCAATTAAT
CCAGGATCTC TATTTATTGC TAAAACTATT TTGGCAATTA CAGCAGGTTC AATGTTTGTG
ATGTGGATAT CAGAACTAAT TACAGAAAGA GGTATTGGAA ATGGTGCATC CTTACTTATT
TTTGTAAATA TTGTTGCTGT ACTGCCTCAG TCATTAGGTG ACACTATTAA ACTTTTTGAA
GGAGGAGACC GAGCAATAGT TGGTCGGGCA ATTATTTTGC TGCTGGTATT CCTCGTAATG
ATAGTAGGTA TTGTATTTGT ACAAGAGGGC AGTCGCAGGA TACCTATACT TTCAGCTCGT
CGTCAAGTGG GTAGAAAATT ATATAGGGAA ACAAAAAGCT ATCTACCTTT ACGGTTGAAC
CAAGGAGGGG TAATGCCAAT TATTTTTGCC TCAGCAGTTC TGATATTACC TGTATCCTTA
GCTCAGTTTG CGAATAGCCC TATTATATCT CAGATTGCTA CTGCTATAAG TCCTAGTGGT
CCTACACCCT GGCTATATGC TTTATTTTAT TTCGTTTTGA TCCTTTTCTT CAGTTACTTC
TACGCTTCTC TAATTATGAA CCCAGTGGAT ATGTCCCAAA ATCTGAAGAA AATGGGGGCA
AGTATTCCAG GTATTCGTCC AGGTAAAACG ACCAGTGACT ATATAGAGAA AGTTTTGAAT
AGGTTGACTT TCCTAGGAGC TATTTTTCTG GGTTTAGTAG CTATAGTTCC TACTATAGTA
GAAAGTGCTA CTCGTGTACC TACATTTAGA GGATTAGGAG CTACTTCTCT ATTAATTCTA
GTAGGTGTAG CAATAGATAC AGCCAAACAA ATTCAAACTT ATGTTATCTC TCAAAGATAC
GAAGGAATGG TTAAGCAATA G
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| Protein sequence | MDISRDKAPT AQETFLQMAQ AAGLRGRLLV TIGLLLLVRL GVYLPVPGIN REAFQARIGD
QALTGFLDLF SGGGFSALGI FALGIIPYIN ASIIIQLMTA ALPSLENLQK NEGEAGRRKI
SQITRYVALG WSVLQSFGLA IYLNSSSVDI NGELVTVSIN PGSLFIAKTI LAITAGSMFV
MWISELITER GIGNGASLLI FVNIVAVLPQ SLGDTIKLFE GGDRAIVGRA IILLLVFLVM
IVGIVFVQEG SRRIPILSAR RQVGRKLYRE TKSYLPLRLN QGGVMPIIFA SAVLILPVSL
AQFANSPIIS QIATAISPSG PTPWLYALFY FVLILFFSYF YASLIMNPVD MSQNLKKMGA
SIPGIRPGKT TSDYIEKVLN RLTFLGAIFL GLVAIVPTIV ESATRVPTFR GLGATSLLIL
VGVAIDTAKQ IQTYVISQRY EGMVKQ
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