| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2945 |
|---|
| Symbol | |
|---|
| ID | 4245287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4577714 |
|---|
| End bp | 4578703 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638107985 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_722582 |
|---|
| Protein GI | 113476521 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1089] GDP-D-mannose dehydratase |
|---|
| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.791043 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAG CATTAATTTC AGGAATTTCC GGTCAAGATG GTTCCTACTT AGCTAAATTG
TTACTCGAAA AAGGTTACAA TGTTTGTGGC ACTTCCAGAG ATGCTCAAAT GTCTACCTTT
AAAAACTTAT CTTATTTAGG TATTCGTGAA CAGATAAAGT TAGATTCTAT GTCTTTAAAT
GACTTTAGAA GTGTCTTACA AATATTAACC AAATATCAAC CAGATGAAAT TTATAATCTA
GCTGGTCAAA GTTCAGTAGG TTTATCTTTT GAGCAACCTG TAGAAACACT AGAAAGTATC
GCTACTGGTA CATTGAATTT ATTAGAAGCA ATTCGTTTTA TTGGAGAAAA AATTAAACTA
TACAATGCTA GTTCCAGTGA ATGTTTTGGG GATACAGAAG GTCAAACTGC GACAGAGATT
ACTCCATTTC GCCCTAGAAG TCCTTACGCT GTTGCTAAAT CTGCAGCTTT TTGGGAAGTA
GCAAATTATC GAGAAGCTTA TAATTTATTT GCTTGTTCTG GAATTTTATT TAATCACGAA
TCTCCTCTCA GACCTCAACG TTTTGTTACT CAAAAAATTG TCTCAGTTGT TTCTAGAATT
GCTCAAGGTA GTAAAGAGAA ATTATCTTTA GGAAATATTT CAGTACAAAG AGATTGGGGT
TGGGCACCAG AATATGTAAA AGCAATGTTT TTAATGTTAC AGCAAGATAA ACCAGATGAT
TATATAATTG CTACTGGAAA AACTTATTCT TTGCAGGATT TTGTATTAGA AGCTTTTGCC
GCTGTAGGAT TAAATTGGCA GGATTATGTA GAGATAGATA AGGGTTTATA TCGTCCTACT
GATATTTTTG TTAGTAAGGC AAATCCAATT AAAGCTGAAC AAAAATTAGG ATGGAAAGCA
GATTATAAAA TGCCAGATGT TGTGCGGATG ATGCTTAAGG ATAGAATGGC TAATTTAGAA
ATTATTGAAA GTCGTAAAAA AATAAAATAA
|
|---|
| Protein sequence | MKTALISGIS GQDGSYLAKL LLEKGYNVCG TSRDAQMSTF KNLSYLGIRE QIKLDSMSLN
DFRSVLQILT KYQPDEIYNL AGQSSVGLSF EQPVETLESI ATGTLNLLEA IRFIGEKIKL
YNASSSECFG DTEGQTATEI TPFRPRSPYA VAKSAAFWEV ANYREAYNLF ACSGILFNHE
SPLRPQRFVT QKIVSVVSRI AQGSKEKLSL GNISVQRDWG WAPEYVKAMF LMLQQDKPDD
YIIATGKTYS LQDFVLEAFA AVGLNWQDYV EIDKGLYRPT DIFVSKANPI KAEQKLGWKA
DYKMPDVVRM MLKDRMANLE IIESRKKIK
|
|---|
| |