| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2925 |
|---|
| Symbol | |
|---|
| ID | 4244762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4543239 |
|---|
| End bp | 4544114 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638107967 |
|---|
| Product | fatty acid desaturase |
|---|
| Protein accession | YP_722564 |
|---|
| Protein GI | 113476503 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.616004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.232814 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAGG CAGGAGTGCA AATAACAGTC CCAAGAGAGT TACTTCACTC ATCTGGAGGC
TTAAATACTA ACTTACTAAT GTTTTTGAGT GCTTTAGGAA TAGTAATTTT CTCAACCTGT
GGTTACTTTT ACTGGCACTT TCCTGGCTGG TGCTGCTTCT TAATGAATGT AGTAGCCTTA
CATATGGCAG GAACAGTCAT TCACGATGCG TCCCATAATT CGGCTCACAA AGACCGTTTA
ATTAATGCTA TTTTAGGTCA TGGGAGTGCT TTACTTTTAG GTTTTGCTTT TCCAGTATTT
ACACGAGTAC ATCTACAACA TCATGCTCAC GTTAACGATC CAGAAAATGA CCCAGATCAT
TTCGTTTCTA CTGGTGGGCC ACTATGGCTA ATTGCAGCTC GTTTTTTTTA CCATGAAATA
TTCTTTTTTA AAAGACGACT GTGGCGAAAG TTTGAGCTAT GGGAATGGTT TTTCAGTCGC
TTAGTAGTCT TTATTATTGT AGGGTTATCT ATCTATTATG GTTTTCTGGG CTATATTTTG
AATTTCTGGT TTTGCCCCGC TTTGGTGGTA GGTATAGCTC TAGGGTTATT CTTTGATTAT
TTGCCTCACC GCCCCTTTCA AGAGCGCGAT CGCTGGCACA ACGCTAGAGT TTATCCCAGT
CCTATTCTCA ATATCCTGAT TTGTGGACAA AACTATCACT TAATTCATCA TCTATGGCCT
TCTATCCCTT GGTATAATTA CAAACCTGCT TATGAGGCAA TGAAACCACT TTTAGATGTT
AAAGGCTCTC CTCAATCTTT GGGACTCTTG CAAGGAAAAA ACTTTTGGAG TTTTCTTTAC
GATGTTTTTT TAGGAATTAG GTTTCATAAA CATTAA
|
|---|
| Protein sequence | MLEAGVQITV PRELLHSSGG LNTNLLMFLS ALGIVIFSTC GYFYWHFPGW CCFLMNVVAL
HMAGTVIHDA SHNSAHKDRL INAILGHGSA LLLGFAFPVF TRVHLQHHAH VNDPENDPDH
FVSTGGPLWL IAARFFYHEI FFFKRRLWRK FELWEWFFSR LVVFIIVGLS IYYGFLGYIL
NFWFCPALVV GIALGLFFDY LPHRPFQERD RWHNARVYPS PILNILICGQ NYHLIHHLWP
SIPWYNYKPA YEAMKPLLDV KGSPQSLGLL QGKNFWSFLY DVFLGIRFHK H
|
|---|
| |