| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2827 |
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| Symbol | |
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| ID | 4245130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 4392554 |
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| End bp | 4393909 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638107877 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_722474 |
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| Protein GI | 113476413 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.658448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.32606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACAAA AACTAACAGA AGGTAAAATA AGCACACTCT TACTAAAGCT AACACTGCCG
ACAGTTTGGG GAATTTTGGC GCTGCTAGGT TTCAGTATTA TTGATACCTA CTTTGTCGCT
CAACTGGGAA CAAAAGAGCT AGCAGCAATA AGCTTCACAT TCCCAGTAAT AACATTCTTA
AATAGTGTAT CAATAGGTCT GGGAATAGGT GTTAGTTCTT GTATTTCAAG GGCTATTGGA
AAGCGCGTTC AAACTCCTGT CCTCGATCGC GATGACTATA AAGTTAAGCG ACTTACTACA
GATAGTTTAA TTTTATCTTT ACTAGTAGGG GCAATTTTAG TCATTCTAGG TTTAGCAACT
ATTGAGCCGC TATTTACTGC TCTAGGGGCA AAAGCAGAAA CTTTGCCTCT AATTCGACAA
TATATGAAAA CTTCGTATTT AGGAGGAATT TTTGCAGTAG TGCCAATAGT TGGTAATAGT
ATTATTCGCG CTACTGGTAA TACATTCGTT CCCAGTGTGG TGATGACTGT AGCAGGTATT
GTTAACCTTG TGCTAGACCC AATACTAATT TTTGGAGTCG GTCCAATTTC AGGGATGGGG
TTACAAGGAG CGGCGTTGGC AACGGTTATT AGTATGGTAG CTACCTTAGC AGCTTCTTTG
TTTTTTCTGC ACTATCACCA ACAAATGATC TGTTGGAAGC TGCCTAGCTT TAAGCTTCTT
CTCCGAAATT GGCAAAATAT CCTTTCTATA GCTATACCTA ATATAGGTCA AAATATAATC
ATACCAATTT CTGTCAGCTT TATTACTAGT TTGATAGCAA CTTATGGCAC TGCAGCAGTG
GCAGCTTTTG GCATTGCTTC TAAGATAGAG GTATTTTGTT TTATAGTATT TTTGGCATTA
TCCAGTAGCT TTATTCCTTT TGTGGGGCAA AACTGGGGAG CAAAACAGTA TAACCGTGTG
TATTTAGGTG GGAACTTAGG GTTTAAGTTT AGTCTTTTTT GGGGAGCTAT AATAGCGATC
GCTTTAGCTA TAGGCGGGAG TTGGTTAGTT TCAATATTTG ATTCAGATCC CGAAGTTATC
GAGGTCGCTA CTAAATATCT ACTGATAATG CCTATTAGTT ATGGTACCCT TGGGATCACG
TTAATTTCTA GTGCAACTTT CAATGCTCTG GGAAAACCTT TACCTTCTGT AATGATGAGT
CTCATAAGAG TGTTATTTTT GTATGTACCT TTAACATATT TGGGAAGTTG GTTATTGGGT
ATCAATGGTA TTTTTTATGG GACTTGTTTT GCGAATTTAG TAGTTGGTAT TGGAGCTTAT
TTTTACTTTA ATAAAACTTT TAAATTCAAC AATTAA
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| Protein sequence | MKQKLTEGKI STLLLKLTLP TVWGILALLG FSIIDTYFVA QLGTKELAAI SFTFPVITFL
NSVSIGLGIG VSSCISRAIG KRVQTPVLDR DDYKVKRLTT DSLILSLLVG AILVILGLAT
IEPLFTALGA KAETLPLIRQ YMKTSYLGGI FAVVPIVGNS IIRATGNTFV PSVVMTVAGI
VNLVLDPILI FGVGPISGMG LQGAALATVI SMVATLAASL FFLHYHQQMI CWKLPSFKLL
LRNWQNILSI AIPNIGQNII IPISVSFITS LIATYGTAAV AAFGIASKIE VFCFIVFLAL
SSSFIPFVGQ NWGAKQYNRV YLGGNLGFKF SLFWGAIIAI ALAIGGSWLV SIFDSDPEVI
EVATKYLLIM PISYGTLGIT LISSATFNAL GKPLPSVMMS LIRVLFLYVP LTYLGSWLLG
INGIFYGTCF ANLVVGIGAY FYFNKTFKFN N
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