Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2798 |
Symbol | |
ID | 4245332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 4339110 |
End bp | 4340075 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638107850 |
Product | polysaccharide deacetylase |
Protein accession | YP_722447 |
Protein GI | 113476386 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.133593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAATT TAGATAGATT ATCTAAGCCG GGAAAACCTT TAACAACAAT TATAGCAGCA GGAGGCAGTT TTTTAATTGG GATACTAATA CCAGATATAT CTGCGAAACT ACACTTAAAC ACAAGAGAAA TCCCACCAGT AACTAGCAGT GCAATTAATC AACAAGCAAA TAGTAAAGAA AACAAATTAG AAATAACTAA AATCAGTCCT ATCCTGGCTA AAAACATTGA TACAACTCGA CAGAAACTTA GGGAATTAGA ATTAAAAATT TTTCAATTTA GTGTACCTAA AAGGTTTCAA GGAAAAACTG TTCAAAATAT TACTCTTAAA AACAAACAAA AAGTTATTGC CTTAACTTTT GATGACGGTC CATGGAAGAA AACTACAGAA CAAATATTAG ATATTCTGAA AACACATAAC ATTAAAGCAA CTTTTTTCGT AGTCGGCCAA TATTTAAACG AACATCAAGA AATAGGGAAA AAAATTGTAG AAGCAGGTCA TGTTATTGCG AATCATACAT GGAACCACCC CGATCAAAAA AGTAAAATTA ATCAAAAGCG TATTGAAAGT GAAATTGAAA GTACAGCAAA GCTTATATAT CAAGTCACAG GTAAGAAGAC TAAACTATTT CGCCCTCCTG GTGGTGTTCT TGAGAATGGT TTAGCTGACT ATGTAAAAGA ACGGAAACAT ACTGTAGTCT TATGGTCTGC TGATTCTGTA GACTGGTATT ACAGGTCAGC TCCAGAAATT ACCAAAAGGG TTTTGAATAA AGCTAGCAAC GGTGGTATTG TATTACTACA TGATGGTGGA GGCCCAAGAA AGCATGTTGT AGAAGCTTTA CCCAAGATCA TCTCTGGTTT GAAAAAACAA GGTTATGAGT TTGTAACAAT ACCAGAACTT CTCACAATTA AAGATAGAGA ATTAAATAAG CAAGAGTTAG CAAAACAACA AAATCAAAAC CAATAA
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Protein sequence | MTNLDRLSKP GKPLTTIIAA GGSFLIGILI PDISAKLHLN TREIPPVTSS AINQQANSKE NKLEITKISP ILAKNIDTTR QKLRELELKI FQFSVPKRFQ GKTVQNITLK NKQKVIALTF DDGPWKKTTE QILDILKTHN IKATFFVVGQ YLNEHQEIGK KIVEAGHVIA NHTWNHPDQK SKINQKRIES EIESTAKLIY QVTGKKTKLF RPPGGVLENG LADYVKERKH TVVLWSADSV DWYYRSAPEI TKRVLNKASN GGIVLLHDGG GPRKHVVEAL PKIISGLKKQ GYEFVTIPEL LTIKDRELNK QELAKQQNQN Q
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