Gene Tery_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2798 
Symbol 
ID4245332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4339110 
End bp4340075 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content33% 
IMG OID638107850 
Productpolysaccharide deacetylase 
Protein accessionYP_722447 
Protein GI113476386 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.133593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATT TAGATAGATT ATCTAAGCCG GGAAAACCTT TAACAACAAT TATAGCAGCA 
GGAGGCAGTT TTTTAATTGG GATACTAATA CCAGATATAT CTGCGAAACT ACACTTAAAC
ACAAGAGAAA TCCCACCAGT AACTAGCAGT GCAATTAATC AACAAGCAAA TAGTAAAGAA
AACAAATTAG AAATAACTAA AATCAGTCCT ATCCTGGCTA AAAACATTGA TACAACTCGA
CAGAAACTTA GGGAATTAGA ATTAAAAATT TTTCAATTTA GTGTACCTAA AAGGTTTCAA
GGAAAAACTG TTCAAAATAT TACTCTTAAA AACAAACAAA AAGTTATTGC CTTAACTTTT
GATGACGGTC CATGGAAGAA AACTACAGAA CAAATATTAG ATATTCTGAA AACACATAAC
ATTAAAGCAA CTTTTTTCGT AGTCGGCCAA TATTTAAACG AACATCAAGA AATAGGGAAA
AAAATTGTAG AAGCAGGTCA TGTTATTGCG AATCATACAT GGAACCACCC CGATCAAAAA
AGTAAAATTA ATCAAAAGCG TATTGAAAGT GAAATTGAAA GTACAGCAAA GCTTATATAT
CAAGTCACAG GTAAGAAGAC TAAACTATTT CGCCCTCCTG GTGGTGTTCT TGAGAATGGT
TTAGCTGACT ATGTAAAAGA ACGGAAACAT ACTGTAGTCT TATGGTCTGC TGATTCTGTA
GACTGGTATT ACAGGTCAGC TCCAGAAATT ACCAAAAGGG TTTTGAATAA AGCTAGCAAC
GGTGGTATTG TATTACTACA TGATGGTGGA GGCCCAAGAA AGCATGTTGT AGAAGCTTTA
CCCAAGATCA TCTCTGGTTT GAAAAAACAA GGTTATGAGT TTGTAACAAT ACCAGAACTT
CTCACAATTA AAGATAGAGA ATTAAATAAG CAAGAGTTAG CAAAACAACA AAATCAAAAC
CAATAA
 
Protein sequence
MTNLDRLSKP GKPLTTIIAA GGSFLIGILI PDISAKLHLN TREIPPVTSS AINQQANSKE 
NKLEITKISP ILAKNIDTTR QKLRELELKI FQFSVPKRFQ GKTVQNITLK NKQKVIALTF
DDGPWKKTTE QILDILKTHN IKATFFVVGQ YLNEHQEIGK KIVEAGHVIA NHTWNHPDQK
SKINQKRIES EIESTAKLIY QVTGKKTKLF RPPGGVLENG LADYVKERKH TVVLWSADSV
DWYYRSAPEI TKRVLNKASN GGIVLLHDGG GPRKHVVEAL PKIISGLKKQ GYEFVTIPEL
LTIKDRELNK QELAKQQNQN Q