Gene Tery_2701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2701 
Symbol 
ID4244964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4178362 
End bp4179213 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content38% 
IMG OID638107764 
Productarogenate dehydrogenase 
Protein accessionYP_722363 
Protein GI113476302 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0589748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATA TAGGTATTGT TGGATTAGGT TTAATTGGTG GCTCAGTTGG ACTCGATTTA 
AGAACCTTAG GTTATCCTGT TTTTGGGGTA TCTCGTCGAG AACAAACTTG TCAAAAGGCG
ATTGCTCTTG GAGCTGTTGA TGAAGCTAGC TTAGAACTAT CTTTGCTATC TATTGCTGAT
TTAATATTTA TTTGTACTCC CATATCCTAT ATTATCCCTA CTTTAGAAGA GCTTATTCCT
TTTCTGTCTC CCTCAGCAAT TCTAACTGAT GTGGGTTCTG TTAAGGTACC TATTGTTGAA
GGTGTTTCTA AAATTTGGCC TAATTTTGTT GGTGGACATC CTATGGCTGG CAAAGCAGAA
AGTGGAATTG AGTTTGCTCA ATTGGGTTTA TTTGAAGATA GACCTTATGT ACTGACTCCT
AATGAAAATA CACCTCTAGA GTCTGTAAAG AAAGTTGAGG CAATAGCTAA GTTGCTCAAA
AGTAAAGTTT ATTTTTGTGA CCCTTATGAA CATGATCGAG CTGTTGCTTG GATCTCTCAT
TTGCCTGTAA TGGCCAGTTC CTGTTTGATA TCTGCCTGCA TGAGTGAGAG TAATCCTACT
ATTGTTAAGT TAGCACGAGA GTTTGCTAGT TCTGGTTTCC ACGATACTAG CCGGGTGGGA
GGGGGTAATC CTGAGTTAGG ACGAATGATG GCTGAACATA ATTGTCTAGA GGTTTTGCGA
TCGCTAATTT CTTTTCGTGA TGAAATTGAT GAATTGATTC AGTATATTGA ACGAAAAGAT
TGGCAGATTA TTGAAGAAAA GTTAAGGTAT ACGGAGCAAA ACAGAAGACT CTTTTTCGGT
AATAAAAATT GA
 
Protein sequence
MINIGIVGLG LIGGSVGLDL RTLGYPVFGV SRREQTCQKA IALGAVDEAS LELSLLSIAD 
LIFICTPISY IIPTLEELIP FLSPSAILTD VGSVKVPIVE GVSKIWPNFV GGHPMAGKAE
SGIEFAQLGL FEDRPYVLTP NENTPLESVK KVEAIAKLLK SKVYFCDPYE HDRAVAWISH
LPVMASSCLI SACMSESNPT IVKLAREFAS SGFHDTSRVG GGNPELGRMM AEHNCLEVLR
SLISFRDEID ELIQYIERKD WQIIEEKLRY TEQNRRLFFG NKN