Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2546 |
Symbol | |
ID | 4244848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3923071 |
End bp | 3925230 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638107621 |
Product | hypothetical protein |
Protein accession | YP_722220 |
Protein GI | 113476159 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0908682 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAAATC AAAATACTGG ATTCAATTTA GAAGTAACAA AAATCCGCCA TGGCTTTGCT GATAAACTTC AAGAAACGGA GAAAATAATT GGTGATTTTG AAAATCAAGC AATAGTTCAA GGAGCATCGG GACAGTTAGA ATTATCTGCT GTTAGAAAGT CTTTACGTAA TGAAATTGGC AAGCTAAAAA ATGGTAAATT TCGCTTTTTA ATCATTGGAG ATTTTAATCG TGGTAAAAGT ACTATTCTTA ATGCATTTTT TGAAAAAAGT TTGCTACCTA TGGGAGTAAC TGCTACTACT GCAATTCCTA CTTTTGTTAA ATATGGTGAA CAGGAAAAAG TAGTAGTTCA TAAGAAAAAT GGTGAACAAG AATCATTAAG TTTGGAGGAA TATAAAAAGA AATATACGCT CAATTCAAAA GGAGTCAAAT CTCTAATAAA GAATGTGTAT AATAATGTAA AAGGAAAATG GCTTGAACCT CTAGATTATG CTGAACTTTA TTGTCCAATT GAAGTTTTGT CAAGAGGAAT AGAGTTTATT GATACAGCAG GATTAAATCA TACAGAAGAG GAAAATCAAA AAACATTTTC GTATATTGAG AAATGTGATG CAATTCTTTT TGTTTTAGCC GCAGATGAAC AATTTACTCA GAAAGAAGAA GGTTACCTAA AAACGTTTTT GGGGTACAAG AAAGAGATTG AAGATATTGA AAACCAGCCA CAATTAACAC AAAGTCAAAG CTCAGATCCA GAAAGCAGAA ACACAAAGGA AGTCAGACCA ATTTTTTACT TGATTAATAA ATGGGAAAAA ATTGAAGAAG ATGAAAAAAA AGAAGTCCAT GAAATTTTTG TTGATAAATT CTGTGAATGT TTAGATATAA CTGAAGATGA AGCAGAAAAA ACGTGGGGAG ATACAATATT TGATGTGTAT GCTAAAACAG CTTTAGAAAA TTTAGAGCAA GGAAAATCTC TTGATGGTAC TGGAATTATA GAATTTAAAA AAAGACTTAG TGATTTTCTA ACTAATGAGA GATTAATGAC AGAATTAAAA CAAGCTGTTA ATAAAGCAGG AATTGCCAGC AGACAGGTAG TGTCGAAAGT TGAGGAAAGA TTGTTTACAC TTGAAGATGA TGTAAAAACA TTGGAAGAAA AAATTGAGAA AACTAAGCCT TGTGTTAATC TTATTAACAA AATTGTTCAA AATGTAAAGG AGAAAATAAA AGACAAAAGA TATCTCTGTA TTGCAAAAGT GGAAGGAGAA TATAAAAGCT ATTTTAATCA ATTAGTTCTC AATTTTGAAA GAGATTTTGA AATGCCTGTA GTATCGGGTA TGGAAAATAA TCAACGTGAA AAATATACCC AATCTTTAGA GAATAAATTA ACAAAATATC GACAAAAAAA GCTGAAAAAT TGGCATAAAA TAAGTACGGG TATCGTGTAT GAGATTATTA ATGACTTAAA CAATTCATTT AACAAAGAAA TTAATGACTA CAATAAACAA AGAGATGCTA TCAGGGAAAT TCTTAATAAA AAAAAGTTTA AAGTTAAAGA CCAGACAAGT TTATCCATGG ATCAAAGTAG TTCATCAGAA AAATCATCAT TAACTCCGGC TGAGGCAAAT GTAACAGGAA GAATGTTATT GGGAGGGACT GGTGGGACAG TAGGTACTGC AGCAGTAGGA GCTGGAGGAG TATCATTAGC CCATGTTTTC GGATCACATA TAGCTTTAAC ACATATTGTT GGTTCTGCTG TGGCTTTAAC TCCTTTAGGA TGGGTTTTAA TTGGTAGTAG TGCTGTTGTG GGAGGAATAG TAGCATGGTG GCAAAGAGAC GAAGAAGTTA AACAATTTCA GAAAAATATG CAGAACAGGG TCAAAGAAGC ATTTAAAAAA TTGCTTGAAG AAGATAAAGT CGAGGCTCTT AAACAGCAAG CCAGAGAGGT ATTTAACCCT TATGAGGAGT CAGCTAAACA AATGAAAGAC GATATTGAGT CTCTAGAAAT ATCCCTTGAT AATTTGTTGG AAAAGAAAAG AACAACTTCA GTTAACATTG AAGAGGAGAA AGAACGTTTA CAAACTTTCG TAGATAATAT TAATGATAAA TTGAAAACAA TAGAAGCAAA ATACAATGAG ATAGCTTTAG CCCAATCTAA AGACAGTTAA
|
Protein sequence | MQNQNTGFNL EVTKIRHGFA DKLQETEKII GDFENQAIVQ GASGQLELSA VRKSLRNEIG KLKNGKFRFL IIGDFNRGKS TILNAFFEKS LLPMGVTATT AIPTFVKYGE QEKVVVHKKN GEQESLSLEE YKKKYTLNSK GVKSLIKNVY NNVKGKWLEP LDYAELYCPI EVLSRGIEFI DTAGLNHTEE ENQKTFSYIE KCDAILFVLA ADEQFTQKEE GYLKTFLGYK KEIEDIENQP QLTQSQSSDP ESRNTKEVRP IFYLINKWEK IEEDEKKEVH EIFVDKFCEC LDITEDEAEK TWGDTIFDVY AKTALENLEQ GKSLDGTGII EFKKRLSDFL TNERLMTELK QAVNKAGIAS RQVVSKVEER LFTLEDDVKT LEEKIEKTKP CVNLINKIVQ NVKEKIKDKR YLCIAKVEGE YKSYFNQLVL NFERDFEMPV VSGMENNQRE KYTQSLENKL TKYRQKKLKN WHKISTGIVY EIINDLNNSF NKEINDYNKQ RDAIREILNK KKFKVKDQTS LSMDQSSSSE KSSLTPAEAN VTGRMLLGGT GGTVGTAAVG AGGVSLAHVF GSHIALTHIV GSAVALTPLG WVLIGSSAVV GGIVAWWQRD EEVKQFQKNM QNRVKEAFKK LLEEDKVEAL KQQAREVFNP YEESAKQMKD DIESLEISLD NLLEKKRTTS VNIEEEKERL QTFVDNINDK LKTIEAKYNE IALAQSKDS
|
| |