| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2478 |
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| Symbol | |
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| ID | 4245247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 3812518 |
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| End bp | 3815760 |
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| Gene Length | 3243 bp |
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| Protein Length | 1080 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638107561 |
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| Product | protein splicing site |
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| Protein accession | YP_722160 |
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| Protein GI | 113476099 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.242027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATAT TAGTAACAGG TGGCGCAGGT TTTCTGGGCT CTCATCTTAT TGATAGATTA
ATAGAACAAG GCCATGAAGT CCTGTGCCTT GATAATTTTT ACACTGGCAA TAAACATAAT
ATTTATAATT GGTTAAATAA TCCTAGCTTT GAGTTAATTC GCCACGATAT TACAGAACCC
ATTAGGTTAG AAGTAGATCA AATTTATCAT CTAGCTTGTC CTGCTAGTCC AATACATTAT
CAGTACAACC CCGTCAAGAC AATTAAAACA AATGTAATGG GGACATTAAA TATGTTAGGT
TTAGCCAAAA GAGTAAAAGC AAAATTCTTT TTGGCTTCTA CATCTGAAGT ATATGGCGAC
CCAGATGTAC ATCCTCAAAC AGAAGAGTAT AGAGGTAATG TTAATTGTAT TGGAATTCGC
TCCTGTTTTG ATTCTAAAAC TGAAATTTTG ACTGAAGCAG GTTGGGTAGC TTTTCCAAAT
CTACAATCAG AAGTTAAAGT AGCAACATTA AACTCAGAAG GTAAAGTTGA ATATCATATT
CCTGAGGAGT ATATTGTACA ATCATATATT GGAGAAATGT ACCGTTTTGC TAATACTAAC
TTTGATTTTT GTGTGACTCC TAATCACTGG ATGTATGTGC GTAATAAAAC TGGTAATTTA
GAGTTTATTA GGGCAGATGA AGCTAAACTT TGGCAGAGTT TAGAGGTGTT AACTGGAGGA
GATTTTGAGG GAGAAAAAGA AGAATGGTTG GAATTAAGAA AAAGCCCTAT AAATTCTCAT
AGAAAAGTAG AAAAAATCTT TATGGATGAC TGGCTAGAAT TTTTAGGTTA TTACATTTCT
GAAGGTAGAG TTGATGTAAA AAAAAGCTTG CGAGTAGTAG GGGGAAATGA TGCTTATGTA
GCAGACTATA ATATATTAAT TGGTCAAGAA AACTCTGAAT TAGCTTTGAA AATAGCTAGT
TGTTTACGCC GTTTAGGATT TAATTTTAGT GAAATTTTAT TTGATTCAGA TAAACATCAA
TTTCGGGTTT GTAGTAAACA GCTAGCTGAG ATGTTATTAC CTTTAGGTAA GTCTGGTGAA
AAATATATTC CTCGCGAATT ATTGAAACTA TCAAAACGAC AGTTATTAAT TCTATTTAAA
GCACTGATAA TGGGTGATAA TTCAGAACAA AAAAATCATT ACACTTATTA TAGTAAATCT
AAGCGATTAG CTGATGATAT ACAAGAGTTA GCACTTCGTT GTGGTTATGC GGCTACAGTA
GTTTCTCATG CAGTGGGGCG TGACCTTTAT CAAGTTAATA TTCGACCTGC TGAGGATGCA
AATTTAGTTG TGCCAGAAAG GTTCCATTAT GTAGGAAAAG TTTATTGTGT TAATGTCACA
AACCATGTGG TTTTTGTAAG ACGAAATGGG CGTGCTGCTT GGTGCGGTCA ATGTTACGAT
GAGGGGAAGC GAGTAGCAGA AACTTTAGCT TTTGATTACC ATCGCCAAAA TAATGTTGAT
ATTAGAGTGG CTAGAATTTT TAATAGTTTG ACTGGAGATC AAAAGGTACT TTATTATATT
GCTAAAAAAC TGTATTATGA AACTTTTGCA GAATGCTATG ATAGAATTAA TGGGGATATA
TCAAGTGTAT CAGTGCCTTG TTTTGATGAA AATTATCAAA CGGTAATTAA ACCAATTTCT
GCAATTTGGA AACATCATGT CAAGAAGAAG GGTTTTAAGA TAAAAATTAC TTGGGGTAAA
CAAATAAAAA TCACAGAAGA TCATAGTCTA TTTACGAGAA ATGAAAATAA TAAACCTCAA
GCAGTTTTCG GAAATGAGAT AAAGGTAGGA GATGAAATAG GAATTCCTAG TTATATCAGT
TTTTTGGAAC AGCCTTTAGA GCCATTCCAC ATTACAGATA AAATATTAAT TCAAGAAGAA
ATATATGTAG AAAGTGAAGA TACAATCTCT TATATTGAAA AGTATGGAGA TAAGATGAGG
GAGTATTTAT TGGCAAAAAG TTTAAGCCCT AGTCAATTTT ATTCGATATT GAAAACTTAT
GAAGCAAAAA ATCAAATTCC TTGGCATCTA TGGAAATATT TAGAACTTCC TCTATCGGAA
AAAGATAAAG TTTGCTATTT ATCTAAAAAG GCAATTAAAA ATTGGATAGA CAATGTAGAA
GAATTATTAT GGTTCTTAGG CTTTTATGTA GCTCGGGGAA GTTTGATCAA AAATGAAGTT
GTGTTGAAAG GGGAACCTAG TCAACTAGAA AAAGTTATAG AATTAATAGA AAGAATCTTT
GAATATAAGT CGGAAATTAA TGATTCAGGA TATATAAGTA TTAAGTCTAA AATTCTGGTT
GATTTAATCG GATATGGATT AAATTTTGGG AATCAAGAAA AAGATATTCC TAATTGGATT
TTACAACTAC CTGAACAACA ATTAATTAGA TTTTTGAAGG GATTCGTTGC TGGGAATAAC
CTAGAAAATC AACTAAATTT CTATCTCGAA TTTAAAACTG ATAGTCAGTT AGTTGCTGAA
AAATTAGTAT TGATTTTATC TAAATTTGGG TTGGTAGCAG ATGTGTCAGA AATAGAGGTA
AATGAGGAAG ATATTGCCAA AATTTATCGA ATAATAATAG AGGGATTAGA AGATAAAAAT
ATTCATAATT TGTCTAAGGT TGAGCAGAAA ATATCAGCTC TAACTACAGG TGATATTGCT
TGGGGAAAAA TAGAAAGTAT TGAGGAGTTT GAAATAGATG ATTATGTGTA TGATTTCTCC
GTGCCAAATT ATGAGAACTT TATAGGGGGA AGCTACAATG TTTTTGCTCA CAATACTTAT
GGACCTAGAA TGTTAGAAAA TGATGGTCGA GTTGTTAGCA ATTTTATTGT ACAAGCCTTA
AAAGGGATAC CTCTAACAGT CTATGGTGAT GGCTCCCAAA CCAGAAGTTT TTGTTATGTT
TCAGATTTGA TAGAAGGGTT TATTCGGTTA ATGAATCAGG ATTTTATCGG GCCAGTTAAC
TTGGGAAACC CAAGAGAATA TACAATATTA GAATTAGCTC AGAAAATTCA AACAATGGTT
AACCCAGGTA CAGAGATAAT ATATAAACCT CTACCACAAG ATGATCCAAA ACAACGACAA
CCAGATATTA CTCGTGGGAA AAAATATTTG GGTTGGGAGC CAACTGTTTT TCTTGAAGAA
GGGTTAAAAT TGACTATAGA AGATTTTCGA GAGCGACTCA AAAATGAATT GCCAAAAAAC
TAA
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| Protein sequence | MRILVTGGAG FLGSHLIDRL IEQGHEVLCL DNFYTGNKHN IYNWLNNPSF ELIRHDITEP
IRLEVDQIYH LACPASPIHY QYNPVKTIKT NVMGTLNMLG LAKRVKAKFF LASTSEVYGD
PDVHPQTEEY RGNVNCIGIR SCFDSKTEIL TEAGWVAFPN LQSEVKVATL NSEGKVEYHI
PEEYIVQSYI GEMYRFANTN FDFCVTPNHW MYVRNKTGNL EFIRADEAKL WQSLEVLTGG
DFEGEKEEWL ELRKSPINSH RKVEKIFMDD WLEFLGYYIS EGRVDVKKSL RVVGGNDAYV
ADYNILIGQE NSELALKIAS CLRRLGFNFS EILFDSDKHQ FRVCSKQLAE MLLPLGKSGE
KYIPRELLKL SKRQLLILFK ALIMGDNSEQ KNHYTYYSKS KRLADDIQEL ALRCGYAATV
VSHAVGRDLY QVNIRPAEDA NLVVPERFHY VGKVYCVNVT NHVVFVRRNG RAAWCGQCYD
EGKRVAETLA FDYHRQNNVD IRVARIFNSL TGDQKVLYYI AKKLYYETFA ECYDRINGDI
SSVSVPCFDE NYQTVIKPIS AIWKHHVKKK GFKIKITWGK QIKITEDHSL FTRNENNKPQ
AVFGNEIKVG DEIGIPSYIS FLEQPLEPFH ITDKILIQEE IYVESEDTIS YIEKYGDKMR
EYLLAKSLSP SQFYSILKTY EAKNQIPWHL WKYLELPLSE KDKVCYLSKK AIKNWIDNVE
ELLWFLGFYV ARGSLIKNEV VLKGEPSQLE KVIELIERIF EYKSEINDSG YISIKSKILV
DLIGYGLNFG NQEKDIPNWI LQLPEQQLIR FLKGFVAGNN LENQLNFYLE FKTDSQLVAE
KLVLILSKFG LVADVSEIEV NEEDIAKIYR IIIEGLEDKN IHNLSKVEQK ISALTTGDIA
WGKIESIEEF EIDDYVYDFS VPNYENFIGG SYNVFAHNTY GPRMLENDGR VVSNFIVQAL
KGIPLTVYGD GSQTRSFCYV SDLIEGFIRL MNQDFIGPVN LGNPREYTIL ELAQKIQTMV
NPGTEIIYKP LPQDDPKQRQ PDITRGKKYL GWEPTVFLEE GLKLTIEDFR ERLKNELPKN
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