Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2452 |
Symbol | |
ID | 4244636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3777196 |
End bp | 3777939 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638107537 |
Product | isochorismatase hydrolase |
Protein accession | YP_722137 |
Protein GI | 113476076 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACAA CTCTAGCTAC TCCTGATACT AGTTTAGCAA CCATTCAAGC TGCTTTACCT ATTGATCCAC AGCCCTATAT TATAGCCGAT CGCCCTACCG GACTCATAGT CGTAGATGTA CTTAATGGTT TTTGCACTGT TGGTTTTGGA CCATTAGCCC CCCAAGAGCC AAACGAACAA ATCGCTACAA TGGTCTCGGA AAGCGATCGC CTAGCTCGTA CTTTTGTAGA AAAAGGTTGG CCTGTATTAG CCTTTTTAGA TACCCATGAA CCAGGAAAAC CCGAGCCTCC TTATCCACCA CATTGTGAAA AGGGTACGGG AGAAGAAGAA CTCGTTCCCG AACTTCAATG GTTACACGAT AACCCCCTGG CAACATTGGT TTTTAAGGAT TGTATTAATG GATTTATAGG TTCTATTGAC ATAGATACCC AAGGTAATGT ATTGTTGGAT TGGATAAATA AGAATAAGCT TGAGGCCCTT GTTGTAGTTG GAATTTGTAC TGATATCTGT GTCATGGACT TTGTTGTTAC TATTCTGTCA GTACGCAATC ATGGTTTAGC GCCTACCTTA AAAGATGTGG CTGTATACGA TCAAGGTTGT GCTACTTTTG ATATGACAGC ACAAATGGCA GCCGAGAAAG GCTTACCCAA AACTGCTATT CATCCACAGA AAATATCTCA TCATGTAGGG TTATATACAA TGGCCGAACG TGGTGCATTT ATTGCTTCTA CTATTAAGCT TTAG
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Protein sequence | MTTTLATPDT SLATIQAALP IDPQPYIIAD RPTGLIVVDV LNGFCTVGFG PLAPQEPNEQ IATMVSESDR LARTFVEKGW PVLAFLDTHE PGKPEPPYPP HCEKGTGEEE LVPELQWLHD NPLATLVFKD CINGFIGSID IDTQGNVLLD WINKNKLEAL VVVGICTDIC VMDFVVTILS VRNHGLAPTL KDVAVYDQGC ATFDMTAQMA AEKGLPKTAI HPQKISHHVG LYTMAERGAF IASTIKL
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