Gene Tery_2452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2452 
Symbol 
ID4244636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3777196 
End bp3777939 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content41% 
IMG OID638107537 
Productisochorismatase hydrolase 
Protein accessionYP_722137 
Protein GI113476076 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAA CTCTAGCTAC TCCTGATACT AGTTTAGCAA CCATTCAAGC TGCTTTACCT 
ATTGATCCAC AGCCCTATAT TATAGCCGAT CGCCCTACCG GACTCATAGT CGTAGATGTA
CTTAATGGTT TTTGCACTGT TGGTTTTGGA CCATTAGCCC CCCAAGAGCC AAACGAACAA
ATCGCTACAA TGGTCTCGGA AAGCGATCGC CTAGCTCGTA CTTTTGTAGA AAAAGGTTGG
CCTGTATTAG CCTTTTTAGA TACCCATGAA CCAGGAAAAC CCGAGCCTCC TTATCCACCA
CATTGTGAAA AGGGTACGGG AGAAGAAGAA CTCGTTCCCG AACTTCAATG GTTACACGAT
AACCCCCTGG CAACATTGGT TTTTAAGGAT TGTATTAATG GATTTATAGG TTCTATTGAC
ATAGATACCC AAGGTAATGT ATTGTTGGAT TGGATAAATA AGAATAAGCT TGAGGCCCTT
GTTGTAGTTG GAATTTGTAC TGATATCTGT GTCATGGACT TTGTTGTTAC TATTCTGTCA
GTACGCAATC ATGGTTTAGC GCCTACCTTA AAAGATGTGG CTGTATACGA TCAAGGTTGT
GCTACTTTTG ATATGACAGC ACAAATGGCA GCCGAGAAAG GCTTACCCAA AACTGCTATT
CATCCACAGA AAATATCTCA TCATGTAGGG TTATATACAA TGGCCGAACG TGGTGCATTT
ATTGCTTCTA CTATTAAGCT TTAG
 
Protein sequence
MTTTLATPDT SLATIQAALP IDPQPYIIAD RPTGLIVVDV LNGFCTVGFG PLAPQEPNEQ 
IATMVSESDR LARTFVEKGW PVLAFLDTHE PGKPEPPYPP HCEKGTGEEE LVPELQWLHD
NPLATLVFKD CINGFIGSID IDTQGNVLLD WINKNKLEAL VVVGICTDIC VMDFVVTILS
VRNHGLAPTL KDVAVYDQGC ATFDMTAQMA AEKGLPKTAI HPQKISHHVG LYTMAERGAF
IASTIKL