| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2382 |
|---|
| Symbol | |
|---|
| ID | 4245030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 3679663 |
|---|
| End bp | 3680367 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638107475 |
|---|
| Product | HEAT repeat-containing PBS lyase |
|---|
| Protein accession | YP_722075 |
|---|
| Protein GI | 113476014 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.509121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.832729 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTAGTAT ATGTAAAGAA AGGTAAACAA AATTCCCAAA TTATTATGGA AATTAAACAA
ATTCAGGTAT ACTTGAAAAG TTCTGATTCT CAAGAAAGAT TGAAAGCACT GACTGAGTTA
AGGAACTACG AGAGTGAAAT TGTAGTTCCC CTGCTAAAAA CCAGACAACA AGACCCAGAA
TTTCTAGTCC GTTCATTTGT GGCAATGGGG TTAGGGAATA AACGTACTCC TGAAGGTTTT
AAAATATTGC TAGAAATGAT GCAAAATGAC CCAGACTACA ACGTGCGAGC GGAAGCAGCA
AATTCTCTAT CTAAGTTTGG AGCCCAAGCA ATTCCTTTTT TAGTAGAAAA ATTTCGCCAA
GACAATAATT GGTTGATGCG TCGGAGCATT CTGGCACCTC TGATAGATAT GCCATTTCCT
GAAGCACTAT ACGAAGTGTG TATGTGCGCG ATCGCTGATG AAGATACAAC AGTGCAGGAA
GTTGCCATTA GTGCTTTAGG TAAGTTAGCA GGGACAAAGA AGGAAACTGA GGCTTTGCAA
AAACTATTAG CTTTTGTCAG TGCCGAATCT TGGAATATCC GGTTACGAGC TGCTCAAGGG
TTAGGGAAAT TTGACGTTCC TCAAGCAAAA GCAGCTTTGA ATTATCTTAG CAAAGATGAC
AATTATAAAG TAGTAGCAGC TGCTTTAGAG AGCTCGCTAT CATAA
|
|---|
| Protein sequence | MLVYVKKGKQ NSQIIMEIKQ IQVYLKSSDS QERLKALTEL RNYESEIVVP LLKTRQQDPE
FLVRSFVAMG LGNKRTPEGF KILLEMMQND PDYNVRAEAA NSLSKFGAQA IPFLVEKFRQ
DNNWLMRRSI LAPLIDMPFP EALYEVCMCA IADEDTTVQE VAISALGKLA GTKKETEALQ
KLLAFVSAES WNIRLRAAQG LGKFDVPQAK AALNYLSKDD NYKVVAAALE SSLS
|
|---|
| |