| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2305 |
|---|
| Symbol | |
|---|
| ID | 4243300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 3571184 |
|---|
| End bp | 3571870 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638107402 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_722002 |
|---|
| Protein GI | 113475941 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.285502 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATTC TTTTGGTGGA TGATGAACCA GAGTTTACTT CTCCTCTAAG TTGTGCTTTG
AATAGGGAGG GTTATAATGT TGATGTTGCT GATCATGGAG AGGCGGGTTT TCAAATGGCT
GTTGAGGGTA ACTATGATTT ATTGATTTTA GATTGGATGT TACCCCAAAA GACAGGGCTG
GAGATTTGTC AAAGGTTGCG ATCGCGCCAT GACTATACCC CTGTTTTATT TCTTACTGCT
AAAGATACAT TAGATGAGCG TGTTAGGGGG TTAGATGCTG GTGCGGATGA TTATTTAGTT
AAGCCTTTTG AGTTACGAGA GTTATTAGCA AGGGTTCGAG CTTTATTGCG TCGCCGTGTT
ATTATTGAAA CATCTACAGC TGATCAAAAT TTACGGGTAG GAAATTTAGA GTTAGATATA
GAAAATAAGG TTGCTTATCG TGGCGGGCAA GTGATTTTCT TATCTGAAAA AGAATGTAAG
CTGTTGGGAT ATTTTATGAA CTATCCCGGG GAACTTTTAA CTCACCAACA AATTTATGAA
TATTTGTGGG GAGAAGGGGG ACAACCAAGT AGTAATGTTT TAGCAGCACA AGTACGGTTA
TTGCGAAGAA AAATAGAGGT GGCTGGGGAC TCGCCATTAA TTCATACTGT TTATGGGAAA
GGTTATTGGT TTAGAATATT AAGCTAA
|
|---|
| Protein sequence | MQILLVDDEP EFTSPLSCAL NREGYNVDVA DHGEAGFQMA VEGNYDLLIL DWMLPQKTGL
EICQRLRSRH DYTPVLFLTA KDTLDERVRG LDAGADDYLV KPFELRELLA RVRALLRRRV
IIETSTADQN LRVGNLELDI ENKVAYRGGQ VIFLSEKECK LLGYFMNYPG ELLTHQQIYE
YLWGEGGQPS SNVLAAQVRL LRRKIEVAGD SPLIHTVYGK GYWFRILS
|
|---|
| |