Gene Tery_2273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2273 
Symbol 
ID4243366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3538187 
End bp3538705 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content38% 
IMG OID638107374 
ProductOstA-like protein 
Protein accessionYP_721974 
Protein GI113475913 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACTTA ATAAAAAAAT ATCACAATCA CTGGTATTAA AAGGATTATT CTTGATATTG 
CCTCTAAGTA TATTCAATTC TATTACATAT CCTACCTTTG CTCAAATTAA CCCTAACCAA
CCCCCAAGAA ATCAAAATTC TTCAGGTCGT AGTCTTACTG TTCGCTCCGA TATTCAAGAA
GCTGATGCTA GAACAGGAGT TGTTACAGCT CGTGGTAACG TCCAAATTAA CTACCCTGCC
CGCAAAATTC AAGCAACAGC AGCTCAAGCT CAATATTTCA GCCGAGAGCG TAGAATTGTT
CTTAGTGGAG ATGTATTTAT ACTACAAGAT GGCAATACAA TTCGGGGAGA AACTGTCACC
TATCTAATAG ATGAAGGACG TTTTATTGCT TTACCCCAGT CACAAGGGCA AGTAGAGTCT
GTATATGTAG TTCCTACTGG TCAAGGAGCA GATATAGAAG GTGCTGTTAG TGCACCATTT
AATCCTAAGC CTGCCTTTAA AACTCCAATT AGTCCATAA
 
Protein sequence
MILNKKISQS LVLKGLFLIL PLSIFNSITY PTFAQINPNQ PPRNQNSSGR SLTVRSDIQE 
ADARTGVVTA RGNVQINYPA RKIQATAAQA QYFSRERRIV LSGDVFILQD GNTIRGETVT
YLIDEGRFIA LPQSQGQVES VYVVPTGQGA DIEGAVSAPF NPKPAFKTPI SP