Gene Tery_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2012 
Symbol 
ID4243439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3134655 
End bp3135641 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content33% 
IMG OID638107126 
Productpeptidase C14, caspase catalytic subunit P20 
Protein accessionYP_721733 
Protein GI113475672 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.482457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.300085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA ATATTAATAA TACAGTTGCA TCTCAAGAAA ATAACAAAAA CAATATAAAA 
GAACAAGTAG AAATGTCTAA TAATATTGCT CAAGATATAC AGCTTGATAA ATATTTTTTG
CAGAAGTTAA TTATAGGAAG TAGTCTCACT TCTTTAGCAT TGCTGTTAGG TGTATTCTTA
ACCAATAAGT CTATATTCGT TAGAAAAAAT GTAGTAAATG AAGGTAATTT ATCTACTATT
AAAACTGAAG AATATACTTC ATCGGAATTA ACTTTACCAG TATCACCTTT AGTATCTGCG
ACTGTTGGTC AATCTACGAA AAAGACTTCT ATTAACAAAA AGGATATTCT AAATCAATTA
ATATTATCTG AAGCTTTAAC TTTGCTTAAT TTAGTTTCAG CCTCTAGTTT TAGCCAAGCA
ATAATCAAAG CTTCTGAAAT TCCTCAAAGC GATCCACTCT ACCCTAAGGC AAAAAATCAA
ATAGAAAACT GGAGTTTGAC TATTCTTGAT ATAGCCAGTG GACGAGCATT AAAAGGAGAT
TATGATGGTG CAATTGCTGC GGCTAAATTG GTACCTCGAA ATGTCAGACC AATTTATCAA
GAAGCACAGT TGGCTATCGC AGAATGGCAA ACAGAAACAG CTAAACAAAA AAAAGTTAAG
GAAGGGTTTA ATGAAGCGTT ACTCAAATCT GCGAAGGAAC AGATTAAGCC TGGACAAGCT
TCCTCTTATA TAATAGCAAT TAACGAAGCT CGTAAAATTC GATCTAGTGA GCCTAAATAT
GAAAAAGCTC AAAAGTTGAT TGCTCAGTGG AGTGATACAA TATTTAGTAT TGCAAAAGTA
CGAGCTAAGA ATAAAAACTT GAGTGAGGCT ATTTTGGCTG GTGAGTTAGT TCCTTATGGA
ACACCAACTT ATGAGTCTGC TCAAAAAGCA TTAGCAGATT GGAAAAGCCA AAAACAAACA
AAAAAAAGAA ATGAGCAAAT AAGGTAA
 
Protein sequence
MNKNINNTVA SQENNKNNIK EQVEMSNNIA QDIQLDKYFL QKLIIGSSLT SLALLLGVFL 
TNKSIFVRKN VVNEGNLSTI KTEEYTSSEL TLPVSPLVSA TVGQSTKKTS INKKDILNQL
ILSEALTLLN LVSASSFSQA IIKASEIPQS DPLYPKAKNQ IENWSLTILD IASGRALKGD
YDGAIAAAKL VPRNVRPIYQ EAQLAIAEWQ TETAKQKKVK EGFNEALLKS AKEQIKPGQA
SSYIIAINEA RKIRSSEPKY EKAQKLIAQW SDTIFSIAKV RAKNKNLSEA ILAGELVPYG
TPTYESAQKA LADWKSQKQT KKRNEQIR