| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2007 |
|---|
| Symbol | |
|---|
| ID | 4243434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 3127156 |
|---|
| End bp | 3128292 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638107121 |
|---|
| Product | dihydroorotate dehydrogenase 2 |
|---|
| Protein accession | YP_721728 |
|---|
| Protein GI | 113475667 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.485926 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTAAATA TTTATCGTTC CGTCCTATTT CCTATTATAT TTTCCGGTTT AAAAGCCGAT
CCAGAATGGG CACATCATCA AGTCCTAAAT ATGCTCAGTT TTATAGATAC TCACTCCGAC
TCTCAACTAG TAAATAGTAT TAGGACAACA ATGGAAAAAT TATTCTGTTT TAAAGACACT
CGTCTAGAGC AAAACTTATG GGAATTAAAC TTTAAAAACC CAGTAGGTTT AGCCCCAGGA
TATGATAAAG ATGGTCAGGC AATTAATATG TGGCCTCAAC TAGGTTTTGG GTTTGCTGAA
CTTGGTACAG TTACCTTCCA TCAACAACCA GGAAATGCGC AACCAAGATT ATTCCGCTTA
CCAAAAGATA AAGCCGTCTT AAACAGAATG GGATTTAATA ATAAAGGAGC TGCCGCCTTA
GCTAAGAAAT TCCAAATTCA AAACAAAAAA AATTCTTTTT TCTTTCCTTA TGGAGTAAAT
ATTGGTAAAT CTAAAATCAC CCCTTTAGAA GCAGCAGCAA CAGATTATTT AGAAAGTTTT
AGACTATTAA AAAATTGTGG AGATTATTTT GTAGTAAATG TATCTTCTCC TAATACCCCA
GGGTTACGTT CCCTGCAAAA CACTGATAGT TTAAGTAAAA TTTTAGAAGT TTTGCCAAGA
GAAAATGAAA GAAAAAAGCC TATTTTAGTT AAGATTGCAC CAGATTTAGA AAATGAAGCG
ATCGCCGCCA TAATAGACCT AATTAAAGAA TATAAAATAT CTGGTATAAT TGCTACAAAC
ACAACTATTA ATCGTGAAAA ATTAACAACT AAAATACTTC CAGCAACAGG CAAACCTATT
ATAGAAGAAG CAGGTGGAAT TAGTGGCAAA CCATTAACCA AAAGATCAAC AGAAATAATT
AAATTTATCT GGCAAGAAAC AAAAGGAAAA TTACCAATTA TTGGGGTAGG TGGTATATTC
ACTTCAGAAG ATGCCTGGAA TAAAATTACT GCTGGTGCCA GTTTAATTCA AATTTATACA
GGATTAGTTT ATCAAGGACC AGGAATAGTC AAACAAATTC TCCAAGGATT ACTAAAAAAG
CTAGATGAAC ATGGATTAAA CTCCATTTCC GAAGCTGTTG GTCTAGCAAA CAAATAA
|
|---|
| Protein sequence | MLNIYRSVLF PIIFSGLKAD PEWAHHQVLN MLSFIDTHSD SQLVNSIRTT MEKLFCFKDT
RLEQNLWELN FKNPVGLAPG YDKDGQAINM WPQLGFGFAE LGTVTFHQQP GNAQPRLFRL
PKDKAVLNRM GFNNKGAAAL AKKFQIQNKK NSFFFPYGVN IGKSKITPLE AAATDYLESF
RLLKNCGDYF VVNVSSPNTP GLRSLQNTDS LSKILEVLPR ENERKKPILV KIAPDLENEA
IAAIIDLIKE YKISGIIATN TTINREKLTT KILPATGKPI IEEAGGISGK PLTKRSTEII
KFIWQETKGK LPIIGVGGIF TSEDAWNKIT AGASLIQIYT GLVYQGPGIV KQILQGLLKK
LDEHGLNSIS EAVGLANK
|
|---|
| |