| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1895 |
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| Symbol | |
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| ID | 4242700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 2916260 |
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| End bp | 2918377 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638107015 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_721623 |
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| Protein GI | 113475562 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTA ATATCTTACC CGGTAATACT TTTCCCATTG GTGCCACTGT CTGCCAAGAC
CCCAAAGGAG TAAACTTCTC TATCTATTCC AAAAATGCTA CAGCAATAGA ATTACTACTA
TTTGATGAAC CATTAGCAGC TAAACCAAAG CAAGTAATTT TACTTGACCC AACACAACAC
AGAACTCATC ATTACTGGCA TATTTTTATT TCTGGTATTG GAGCGGGACA AATATATGCC
TATCGAGTCT ATGGACCCTT TAACCCAGAA AAAGGTCATC GGTTTGATGG TACAAAAGTT
TTACTTGACC CTTATGCTAG AATTGTAGTG GGACAAGAAA AATATAGTCG TAAAGCTGCT
ACAGGTAACG GTAATAATTG TGCTTACGCT CTCAAGGGGG TGGTAGTTGA CCCAACTACC
TATGACTGGG AAGATGACAA ACCTTTAGAA ACTCCCTATG CTAAAACAGT TATCTATGAA
ATGCATGTTG GTGGATTTAC TCGTCATCCT AATTCTGGTG TTGCTCCTGA AAAACGGGGT
ACTTTTGCTG GGCTAATAGA AAAAATTCCC TATCTCAAAG AATTGGGAAT TACTGCAGTG
GAATTATTAC CAGTCCAGCA ATTTGATGAA CAAGATGTGC GCGAACCCCT AATCAATTAT
TGGGGCTATA GTCAGATCGC TTTTTTTGCA CCTCACCACA GTTATAGTTC CCGCAAAGAT
ATTTTCGGAC CAATGGATGA GTTCCGAGAT ATGGTAAAGG CATTGCATAA AGAAGGAATA
GAAGTCATTC TGGATGTAGT TTTTAATCAC ACTGCAGAGG GTAACGAAAA CGGACCAACA
GTTTCTTTCC GGGGGTTAGA AAACTCAACT TACTACATTC TAGAAAAGAA TGATCGTGGA
TACTACAGCA ATTATACCGG TTGTGGCAAT ACCTTCAATA CAAATAATCC TTTTGTACAT
CGCTTAATTG TTGACTGTCT TTGTTACTGG GTTAGAGAAA TGCATGTTGA TGGGTTCCGG
TTTGACTTGG CATCTGTTAT GTCTCGGAGC ATGACTGGTG ATCCCTTAGA AGATCCTCCT
GTTTTGTGGG CAATTGAGTC AGATCCGGTT TTGGCAGGCA CAAAAATTAT TGCTGAAGCT
TGGGATGCAG CCGGACTTTA TCAGGTGGGT TCATTTATTG GCGATCGCTT TGCTGAATGG
AACGGACATT ATCGTGACGA TGTTCGTCAA TTTGTCAAAA GTGATCCCCA AATAGTTGAG
AAATTGGCAG CAAGAATTAT GGGTAGTCCT GATATTTATC CTAAACCAGA TCGAGAACCA
AATCATAGTA TTAACTTTAT TACTTGTCAT GATGGTTTTA CTATGAATGA TCTGGTTTCT
TATAATGAGA AACATAATGA AGCTAATTGT GAAGATAACC GCGATGGTGC TAATCATAAT
TTTAGTTGGA ATTGTGGAAT TGAAGGAACT ACAGATCAAG AAGAAATTGA AATGTTAAGA
CTGCGACAAA TTAAGAACTT TTTTACTATA CTGTTTTTTT CTCAAGGTAC ACCTATGATT
TTGATGGGAG ATGAAGTCAG GCGAACTCAA TTAGGTAACA ACAATAGTTA TTGTCAGAAT
AATAAAAGTA GTTGGTTTGA CTGGAGTCAA ATTGATCAAC AAAATGATTT ATTACGATTT
GTCAAAAAGA TTATTCATTT CACTCAAGAA TTACAAATTA CACAGTTAGA TAAGGTTTTA
GCTACTGTAG GAGCGATACC CGAATCATCT TTGGTTAGCA CTAAAGAGAA AACTAACTTG
AATAAAGTAC CTAATATTAG TTGGCATGGA ATACATTTAG GTATACCTGA TTGGAATGTA
GGTTCCAGGA CTCTAGCTTT TAGTTTAAAA CATCCAGAAA GTGGTGAATA TTTTCACATT
ATGTTGAATG CTTATTGGAA ACCTTTAATG TTTGAATTGC CACCTTTGGA AAGGGGGGAA
AATTGGTATT TAATTGTTAA TACTGCTTTT ACTTCTCCTA AAGATTTTAA TAACCTTGAT
GTGGCAACAA AAGTTATTGG TGTTAGATAC CGCTTAGAGC CCCGGGCTGC TGTTATTTTA
ATGACAAAAA GAGATTAG
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| Protein sequence | MNLNILPGNT FPIGATVCQD PKGVNFSIYS KNATAIELLL FDEPLAAKPK QVILLDPTQH
RTHHYWHIFI SGIGAGQIYA YRVYGPFNPE KGHRFDGTKV LLDPYARIVV GQEKYSRKAA
TGNGNNCAYA LKGVVVDPTT YDWEDDKPLE TPYAKTVIYE MHVGGFTRHP NSGVAPEKRG
TFAGLIEKIP YLKELGITAV ELLPVQQFDE QDVREPLINY WGYSQIAFFA PHHSYSSRKD
IFGPMDEFRD MVKALHKEGI EVILDVVFNH TAEGNENGPT VSFRGLENST YYILEKNDRG
YYSNYTGCGN TFNTNNPFVH RLIVDCLCYW VREMHVDGFR FDLASVMSRS MTGDPLEDPP
VLWAIESDPV LAGTKIIAEA WDAAGLYQVG SFIGDRFAEW NGHYRDDVRQ FVKSDPQIVE
KLAARIMGSP DIYPKPDREP NHSINFITCH DGFTMNDLVS YNEKHNEANC EDNRDGANHN
FSWNCGIEGT TDQEEIEMLR LRQIKNFFTI LFFSQGTPMI LMGDEVRRTQ LGNNNSYCQN
NKSSWFDWSQ IDQQNDLLRF VKKIIHFTQE LQITQLDKVL ATVGAIPESS LVSTKEKTNL
NKVPNISWHG IHLGIPDWNV GSRTLAFSLK HPESGEYFHI MLNAYWKPLM FELPPLERGE
NWYLIVNTAF TSPKDFNNLD VATKVIGVRY RLEPRAAVIL MTKRD
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