Gene Tery_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1836 
Symbol 
ID4241912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2811499 
End bp2812203 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content38% 
IMG OID638106957 
Productpeptidase M10A and M12B, matrixin and adamalysin 
Protein accessionYP_721565 
Protein GI113475504 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5549] Predicted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.764837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACTA ACAAGATAGC ATCGGTTTAT TTACGGTTCT TTTTTTTCGG TTTTGCTATT 
TGGATGGTAG CTTTCTATTT TTTGTTTTCA ATTCCGACTA CAGCAGTTAC TCCTCAAAAT
TTACCTTCTC TGAAAGTTTA TCCTCTACCA GAAACTTTGG CACAATGGCA AGACCCTAGT
GGTAGTGGTG ATTATTTTGA TCAAATTGAA GTTCAGGATG TAGGTTATCT AATTTGGTCG
CAATTTCCGA TCAAGGTTTA TGTCGAATCT TCTGATAATG ATGAGTCTCG CTCTCGTCAA
TGGGTTAAGA CTGTAGTAGA TGCTATTTGG GAATGGAATA TTTATTTACC TTTGCAAGTG
GTAGATAGCC CAGAAGTTGC TGATATTAAA ATTTTTAACA AGCGACCTCC TCTGAGAGCA
GGAAATTTAA GAGCGCGTTC GGCAGAAGCT CGCTATCAGT TATCTGAAGA TGAGAATGGT
ATTTTATCTC ATAATTTTGT GATTTGGTTG AGTCCTATGC AAGTAGGTAA ATATCTGCCT
GCTGCTGCTC GTCATGAGTT TGGTCATGCT TTGGGTATTT GGGGTCATAG TCCTGAGAAA
ACTGATGTTA TGTATTATTC TCAGGTGGCA GAACCTCCTC CTATTTCATC TAGGGATATT
AATACTCTGA AGCGGATATA TTTGCAAAGT ACTAGACTAG GCTAA
 
Protein sequence
MFTNKIASVY LRFFFFGFAI WMVAFYFLFS IPTTAVTPQN LPSLKVYPLP ETLAQWQDPS 
GSGDYFDQIE VQDVGYLIWS QFPIKVYVES SDNDESRSRQ WVKTVVDAIW EWNIYLPLQV
VDSPEVADIK IFNKRPPLRA GNLRARSAEA RYQLSEDENG ILSHNFVIWL SPMQVGKYLP
AAARHEFGHA LGIWGHSPEK TDVMYYSQVA EPPPISSRDI NTLKRIYLQS TRLG