Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1836 |
Symbol | |
ID | 4241912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2811499 |
End bp | 2812203 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638106957 |
Product | peptidase M10A and M12B, matrixin and adamalysin |
Protein accession | YP_721565 |
Protein GI | 113475504 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5549] Predicted Zn-dependent protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.764837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTACTA ACAAGATAGC ATCGGTTTAT TTACGGTTCT TTTTTTTCGG TTTTGCTATT TGGATGGTAG CTTTCTATTT TTTGTTTTCA ATTCCGACTA CAGCAGTTAC TCCTCAAAAT TTACCTTCTC TGAAAGTTTA TCCTCTACCA GAAACTTTGG CACAATGGCA AGACCCTAGT GGTAGTGGTG ATTATTTTGA TCAAATTGAA GTTCAGGATG TAGGTTATCT AATTTGGTCG CAATTTCCGA TCAAGGTTTA TGTCGAATCT TCTGATAATG ATGAGTCTCG CTCTCGTCAA TGGGTTAAGA CTGTAGTAGA TGCTATTTGG GAATGGAATA TTTATTTACC TTTGCAAGTG GTAGATAGCC CAGAAGTTGC TGATATTAAA ATTTTTAACA AGCGACCTCC TCTGAGAGCA GGAAATTTAA GAGCGCGTTC GGCAGAAGCT CGCTATCAGT TATCTGAAGA TGAGAATGGT ATTTTATCTC ATAATTTTGT GATTTGGTTG AGTCCTATGC AAGTAGGTAA ATATCTGCCT GCTGCTGCTC GTCATGAGTT TGGTCATGCT TTGGGTATTT GGGGTCATAG TCCTGAGAAA ACTGATGTTA TGTATTATTC TCAGGTGGCA GAACCTCCTC CTATTTCATC TAGGGATATT AATACTCTGA AGCGGATATA TTTGCAAAGT ACTAGACTAG GCTAA
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Protein sequence | MFTNKIASVY LRFFFFGFAI WMVAFYFLFS IPTTAVTPQN LPSLKVYPLP ETLAQWQDPS GSGDYFDQIE VQDVGYLIWS QFPIKVYVES SDNDESRSRQ WVKTVVDAIW EWNIYLPLQV VDSPEVADIK IFNKRPPLRA GNLRARSAEA RYQLSEDENG ILSHNFVIWL SPMQVGKYLP AAARHEFGHA LGIWGHSPEK TDVMYYSQVA EPPPISSRDI NTLKRIYLQS TRLG
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