| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1774 |
|---|
| Symbol | surE |
|---|
| ID | 4242239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 2706719 |
|---|
| End bp | 2707417 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638106899 |
|---|
| Product | stationary phase survival protein SurE |
|---|
| Protein accession | YP_721507 |
|---|
| Protein GI | 113475446 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0496] Predicted acid phosphatase |
|---|
| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00468651 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAACGT CTTTTTTAAT CACTAATGAT GATGGTATTG ACGCTCCTGG AATTCGTGCA
TTACATAAGG CACTATCCCA AGTGACTTCG GACCGCATTG TTATGGTTGC ACCGAAACAC
CACCAGTCCG GCTGTGGCCA TCAAGTCAAT ATCCGCACAG TTATACCAGT AGAATGGCGT
TCTGAAACTG AGGTGAGTGT TGATAGTACG CCGGCTGACT GTGTTCGTTT GGGGGTAAAC
TATCTGTATG ATGATATCAA TTTTGTGGTC TCTGGAGTTA ATAGCGGCTG TAATATGGGC
TCGGATATTT ATCCTTCTGG AACTATTGCA GCGGCTAGAG AGGCTACAAT ACATCGAATT
CCAGCGATCG CTTTTTCTCA TTTTAAGAGA AATGACTGGG AAATTGACTG GGAAAGAGCA
ATACAGTGGA CGGTGATGGT CTTGAAGAAG TTATTAGCTG AACCACCTGA GGAAGGAACT
TTATGGACGG TTAATTTTCC CCACCTTGAA CCTGATGCAC CTGAGCCTGA AATGGTTTTT
TGTCGCCTCT GTAACCGCCC TCTACTTACA GAATTTGTTA AAAAAGAGAA CGGATATCTT
TATGTGGGAT ACGATCTTAA CCGAAAGTCT GATCCAGGGA CTGATGTTGA TGTGTGTTTA
TCGGGAAATA TTGCTATAGC TAAGGCTCGC TTATGGTGA
|
|---|
| Protein sequence | MVTSFLITND DGIDAPGIRA LHKALSQVTS DRIVMVAPKH HQSGCGHQVN IRTVIPVEWR
SETEVSVDST PADCVRLGVN YLYDDINFVV SGVNSGCNMG SDIYPSGTIA AAREATIHRI
PAIAFSHFKR NDWEIDWERA IQWTVMVLKK LLAEPPEEGT LWTVNFPHLE PDAPEPEMVF
CRLCNRPLLT EFVKKENGYL YVGYDLNRKS DPGTDVDVCL SGNIAIAKAR LW
|
|---|
| |